Transcript Information: S_Transcript_140825.p2


Annotated TAIR IDAT1G74900.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)OTP43
Annotation TypeHomolog
Chromosome Positionchr1:28133933-28135381 | Forward length=453
E-Value3E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5683151984701
Replicate 26.0085894965147
Replicate 37.3770944334402
Condition 2: 8 Hour
Replicate 18.8931414939533
Replicate 27.5207491171847
Replicate 37.8913989005676
Condition 3: 24 Hour
Replicate 16.7858574247378
Replicate 27.6188983597083
Replicate 37.4056215487362


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140825.p2 GENE.S_Transcript_140825~~S_Transcript_140825.p2 ORF type:complete len:235 (+),score=26.55,PPR_2|PF13041.2|2.3e-07,PPR_2|PF13041.2|0.0038,PPR_2|PF13041.2|1.3e-07,PPR_1|PF12854.3|0.0025,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|2.9e-08,PPR|PF01535.16|2.8e-06,PPR|PF01535.16|0.019,PPR|PF01535.16|0.00039,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|0.00066,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.014 S_Transcript_140825:78-782(+)
ATGTTCCTCCAACCAACCAAAACCCTCCTCAAACCCTTCACCGCAACCACCACAACTCCACAACAACCACCATGTCCAACCACCATAGCCAACCTAATTCTCACAACACCCGACCTCAAAACCCTCTCTAAAACCCTCCTCAACTCCTCCCTCTGGTCCGAACCCTTAGTGAACCAAACCCTCAAACGCCTCTGGAACCATGCCCCTAAAGCCCTTCAATTCTTCCACATTCTTGACCACCACCCCCACTACTCCCACTCTCTCTCCTCCTTCCACCACGCCATCGACCTCGCCGCCCGCTTGCGGGACCACCGAACCCTCTGGACCCTCGTGGCCCGTCTCCGGTCCCGCAAGCTGGGCCCCACTTCAGTCACTTTCTCTATAATAATTGAAAGGTATGTATCTGCTGGTAAGCCTGATAGAGCTGTTAAGCTTTTCTTTTCTATGCAGGAACATGGGTGCCCACCCCCTGATTTGAATTCCTTCAATAATTTGCTTGACATTCTTTGCAAATCGAGACGGGTCGAAAAGGCCCATAACTTGTTGAGCCTTTGTTGTAGAGGAGGAGGGAAATTTAGGCCCGATGTTGTTACTTATAATACTATTGTTAATGGGTGGTGTTTGGTTAAGAGGACACCTAAGGCTTTGGCTGTGTTGAAGGAGTTGGTTGATAAGGGTTTAAGCCCTACATTGACTACTTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140825.p2 GENE.S_Transcript_140825~~S_Transcript_140825.p2 ORF type:complete len:235 (+),score=26.55,PPR_2|PF13041.2|2.3e-07,PPR_2|PF13041.2|0.0038,PPR_2|PF13041.2|1.3e-07,PPR_1|PF12854.3|0.0025,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|2.9e-08,PPR|PF01535.16|2.8e-06,PPR|PF01535.16|0.019,PPR|PF01535.16|0.00039,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|0.00066,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.014 S_Transcript_140825:78-782(+)
MFLQPTKTLLKPFTATTTTPQQPPCPTTIANLILTTPDLKTLSKTLLNSSLWSEPLVNQTLKRLWNHAPKALQFFHILDHHPHYSHSLSSFHHAIDLAARLRDHRTLWTLVARLRSRKLGPTSVTFSIIIERYVSAGKPDRAVKLFFSMQEHGCPPPDLNSFNNLLDILCKSRRVEKAHNLLSLCCRGGGKFRPDVVTYNTIVNGWCLVKRTPKALAVLKELVDKGLSPTLTTL*

Click here to download the sequence:
Link to NCBI Protein BLAST