Transcript Information: S_Transcript_140873.p1


Annotated TAIR IDAT1G05230.1
Annotated Gene Namehomeodomain GLABROUS 2
Annotated Gene Symbol(s)HDG2
Annotation TypeOrtholog
Chromosome Positionchr1:1513388-1517024 | Reverse length=721
E-Value7.3E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3985966778489
Replicate 22.8407025181349
Replicate 32.1371410912327
Condition 2: 8 Hour
Replicate 13.2949100919175
Replicate 23.7446441929156
Replicate 33.567888654911
Condition 3: 24 Hour
Replicate 12.062607024863
Replicate 22.1399307067796
Replicate 31.6237367642779


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140873.p1 GENE.S_Transcript_140873~~S_Transcript_140873.p1 ORF type:3prime_partial len:233 (+),score=57.62,Homeobox|PF00046.25|1.1e-18 S_Transcript_140873:369-1064(+)
ATGTATGGAGATTGTCAAGTAGTTCTACCAACAACAATGGGAGGCACAGGAGGAGATCATCACCATCATCACCATCAAAATGATGGTTCTCGATTCTCTTCTCCAGTTAGAAACCCTAATTCCACTTCTTCTCCCTTCAACTTCATGGCTTCTTTACCTTCTTCCTTCCATCCTTCTTTTCCAACCAATCTCATACCCTCATCTGTGAAGGAGGAAAGAGGGAAAGAAGAGATGATGGAAAGTATGAGTATGTCAGGAAGTGAGCTGAACATTGAAGGAGGTCAAGGAGGGCTTTCAGGAAATGAGCTTGATAGTTTAGCTCATGATCCTAATAACACTTCTTCTGGTTTACAATTACCGTCGTCGCAACAAAACCCTAAGAAGAAGCGCTATCATCGCCATACTGCTCGCCAGATTCAAGAAATGGAAGCGTTGTTTAGGGAATGTCCACACCCAGATGACAAGCAAAGGATGAAACTCAGCCAAGAGCTAGGGTTGAAGCCTCGTCAAGTCAAGTTCTGGTTCCAAAATCGACGTACCCAAATGAAGGCACAACAAGATAGAACGGATAATGTGATTTTGAGAGCAGAAAATGACAACTTAAAGAACGAGAACTATCGATTGCAAGCTGTGTTGAAGAGCCTCATATGTCCTAGTTGTGGAGGTGGAAGCATCCTTGGGGAAGTAGCTTACGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140873.p1 GENE.S_Transcript_140873~~S_Transcript_140873.p1 ORF type:3prime_partial len:233 (+),score=57.62,Homeobox|PF00046.25|1.1e-18 S_Transcript_140873:369-1064(+)
MYGDCQVVLPTTMGGTGGDHHHHHHQNDGSRFSSPVRNPNSTSSPFNFMASLPSSFHPSFPTNLIPSSVKEERGKEEMMESMSMSGSELNIEGGQGGLSGNELDSLAHDPNNTSSGLQLPSSQQNPKKKRYHRHTARQIQEMEALFRECPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQMKAQQDRTDNVILRAENDNLKNENYRLQAVLKSLICPSCGGGSILGEVAYD

Click here to download the sequence:
Link to NCBI Protein BLAST