Transcript Information: S_Transcript_140876.p1


Annotated TAIR IDAT1G05230.1
Annotated Gene Namehomeodomain GLABROUS 2
Annotated Gene Symbol(s)HDG2
Annotation TypeOrtholog
Chromosome Positionchr1:1513388-1517024 | Reverse length=721
E-Value1.1E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1974037717122
Replicate 23.9470128107481
Replicate 32.2841920837487
Condition 2: 8 Hour
Replicate 12.5433951754379
Replicate 24.3101726737088
Replicate 33.8133855807077
Condition 3: 24 Hour
Replicate 12.2045295265737
Replicate 23.3267980295556
Replicate 32.0825541251931


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140876.p1 GENE.S_Transcript_140876~~S_Transcript_140876.p1 ORF type:5prime_partial len:218 (-),score=58.60,Homeobox|PF00046.25|5.7e-18 S_Transcript_140876:97-750(-)
CCTCCTTCAATGTTCAGCTCACTTCCTGACATACTCATACTTTCCATCATCTCTTCTTTCCCTCTTTCCTCCTTCACAGATGAGGGTATGAGATTGGTTGGAAAAGAAGGATGGAAGGAAGAAGGAGGGAAAGAAGAGATGATGGAAAGTATGAGTATGTCAGGAAGTGAGCTGAACATTGAAGGAGGAGGTCAAGGAGGGCTTTCAGGAAATGAGCTTGATAGTTTAGCTCATGATCCTAATAACACTTCTTCTGGTTTACAATTACCGTCGTCGCAACAAAACCCTAAGAAGAAGCGCTATCATCGCCATGCTGCTCGCCAGATTCAAGAAATGGAAGCGTTGTTTAGGGAATGTCCACACCCAGATGACAAGCAAAGGATGAAACTCAGCCAAGAGCTAGGGTTGAAGCCTCGTCAAGTTAAGTTCTGGTTCCAAAATCGACGTACCCAAATGAAGGCACAACAAGATAGAACGGATAATGTGATTTTGAGAGCAGAAAATGACAACTTAAAGAACGAGAACTATCGATTGCAAGCTGTGTTGAAGAGCCTCATATGTCCTAGTTGTGGAGGTGGAAGCATCCTTGGGGAAGTAGCTTACGATGAGCAGCAACTTCACGTGGAAAATGCAAGGCTCAAGGAAGTAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140876.p1 GENE.S_Transcript_140876~~S_Transcript_140876.p1 ORF type:5prime_partial len:218 (-),score=58.60,Homeobox|PF00046.25|5.7e-18 S_Transcript_140876:97-750(-)
PPSMFSSLPDILILSIISSFPLSSFTDEGMRLVGKEGWKEEGGKEEMMESMSMSGSELNIEGGGQGGLSGNELDSLAHDPNNTSSGLQLPSSQQNPKKKRYHRHAARQIQEMEALFRECPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQMKAQQDRTDNVILRAENDNLKNENYRLQAVLKSLICPSCGGGSILGEVAYDEQQLHVENARLKEVI*

Click here to download the sequence:
Link to NCBI Protein BLAST