Transcript Information: S_Transcript_140899.p1


Annotated TAIR IDAT3G27730.1
Annotated Gene NameATP binding;ATP-dependent helicases;DNA helicases
Annotated Gene Symbol(s)RCK, MER3
Annotation TypeOrtholog
Chromosome Positionchr3:10273952-10280213 | Reverse length=1133
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.83855227772542
Replicate 20.65859073306014
Replicate 30.64228434121992
Condition 2: 8 Hour
Replicate 11.4853505693525
Replicate 21.5582382137123
Replicate 32.1209798611922
Condition 3: 24 Hour
Replicate 10.21736202478203
Replicate 20.60136150119661
Replicate 31.4221384905041


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140899.p1 GENE.S_Transcript_140899~~S_Transcript_140899.p1 ORF type:3prime_partial len:603 (+),score=116.52,DEAD|PF00270.25|1.6e-22,DEAD|PF00270.25|1.6e+03,Sec63|PF02889.12|1.3e-16,Helicase_C|PF00271.27|9.5e+03,Helicase_C|PF00271.27|6.2e-09,ResIII|PF04851.11|9.1e-10 S_Transcript_140899:226-2031(+)
ATGGAATCATACAGCCTGAGATCTGTGTTGGAGTTGCCACCTCCTTTCAGATCTACCTTCAATTTCAGATATTTCAATTCTCTGCAGAGCGAATGCTTTGCTTCATGTTTCAACTCGGATGTGAACATGGTTATTTCTGCACCAACTGGGAGTGGCAAAACAGTACTCTTTGAGCTGTGCATTTTGAGGCTTCTCTCTAGGTTCCTTTCAGCGGATGGGAGATTCATACATGTCAAAGGCACCCTCAAAACGATCTATGTAGCACCTTCCAAGGCTTTGGTACAGGAGAAGGTTAGGGATTGGAACCAAAAGCTTGGTGCATGGGGTATAAATTGCCTTGAGCTGACTGGGGACAATGATTCATACCACTTGAAGAACATTCAGGAAGCAGACATAATTCTAACCACCCCAGAGAAGTTTGATGCTGTGACTCGATATCGCATAAAGGATGGTGGCTTGAGTTTTTTCAGTGACATAGCACTTGTACTCATTGATGAAGTACACCTGTTAAATGAGCCACGCGGTGCTGCTTTGGAGGCCATAGTGAGTAGGATTAAAATGCTTTCTTGTCGACCTGAATTGAAATCAAGCCCTCTGGCCAGTGTACGTTATGTAGCTGTTTCAGCATCAATCCCGAATCTGGAGGATCTTGCGGAGTGGCTAATGGTTCCTCCTGAAGGGATGAAAAGGTTTGGTGAGGAAATGAGGCCTGTCAAGCTGACTACCAGAGTTTTTGGGTATGCAGCGGCAAAGAATGATTTTCTCTTTGAAAAGCGGCTCCAAAACTATATATTCGATATTTTGATGCAATACTCTAGAGGGAAATCTGCTCTTGTTTTCTGTTCAACAAGAAAGGGGGCACAAGAGGCAGCGCAGAAGATCTCTCAGACAGCTATGACATATGGATATTCAAATCCATTTATCAAGGCTCAAGAACAACAAGAAAGATTGAGGGAGGCTTCATTATCATGCAGTGACAAACAACTGCAATCATACATTCTCTATGGCGTTGGCTATCACAATGGCGGTCTCTGCATGAAGGATCGAAACCTTGTGGAGAGTCTTTTTCTGAATGGTGATATTCGAATTCTGTGCACGACAAACACACTTGCACATGGAATCAACCTACCTGCACATACAGTTGTGATCAAATCAACACAGCACTACAATAAGGAAAAGGGAACATACACGGAGTATGACCGATCCACTGTATTGCAGATGTGTGGCAGAGCAGGTCGTCCTCCATTTGATGATACAGGAATGGTTATTATAATGACAAGAAAAGAAACAGTACATTTGTATGAAAATCTTTTGCATGGATGTGAAGTTGTGGAATCACAATTGCTTTCTTGTATGATGGAGCATCTAACTGCGGAAATAGTACAGCTTACTGTTCCTGATGTTACACGAGCGATTGAATGGATGAAGTGCTCATACTTGTATGTGCGCATGAAAAAGAACCCAGAGACTTATGCTGTGAAAGGGATCTCTAGAGACCATATTGAGAGGCATATGCAAGATATTTGTGTTCAGAAAGTCAATGAGTTATCAAGCAATCAGATGGTTTGGACTGATGAATATGGTTTTCTGCTGAAGCCTCTTGAGCCTGGAAGGTTGATGACAAAATACTATTTGAAATTCAGCACAATGAAGTACATAATACAGGCTCAATCAAACTGCAGTCTACAAGATGCACTTCATATTGTTTGCCAAGCAGAGGAGTTTTCTTGGATACAGCTAAGAAGGAATGAGAAGAAGCTTCTAAATGATATCAATACTGATAAAGAAGGCCGGCTTCGCTTTCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140899.p1 GENE.S_Transcript_140899~~S_Transcript_140899.p1 ORF type:3prime_partial len:603 (+),score=116.52,DEAD|PF00270.25|1.6e-22,DEAD|PF00270.25|1.6e+03,Sec63|PF02889.12|1.3e-16,Helicase_C|PF00271.27|9.5e+03,Helicase_C|PF00271.27|6.2e-09,ResIII|PF04851.11|9.1e-10 S_Transcript_140899:226-2031(+)
MESYSLRSVLELPPPFRSTFNFRYFNSLQSECFASCFNSDVNMVISAPTGSGKTVLFELCILRLLSRFLSADGRFIHVKGTLKTIYVAPSKALVQEKVRDWNQKLGAWGINCLELTGDNDSYHLKNIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVLIDEVHLLNEPRGAALEAIVSRIKMLSCRPELKSSPLASVRYVAVSASIPNLEDLAEWLMVPPEGMKRFGEEMRPVKLTTRVFGYAAAKNDFLFEKRLQNYIFDILMQYSRGKSALVFCSTRKGAQEAAQKISQTAMTYGYSNPFIKAQEQQERLREASLSCSDKQLQSYILYGVGYHNGGLCMKDRNLVESLFLNGDIRILCTTNTLAHGINLPAHTVVIKSTQHYNKEKGTYTEYDRSTVLQMCGRAGRPPFDDTGMVIIMTRKETVHLYENLLHGCEVVESQLLSCMMEHLTAEIVQLTVPDVTRAIEWMKCSYLYVRMKKNPETYAVKGISRDHIERHMQDICVQKVNELSSNQMVWTDEYGFLLKPLEPGRLMTKYYLKFSTMKYIIQAQSNCSLQDALHIVCQAEEFSWIQLRRNEKKLLNDINTDKEGRLRFH

Click here to download the sequence:
Link to NCBI Protein BLAST