Transcript Information: S_Transcript_140932.p1


Annotated TAIR IDAT1G79490.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)EMB2217
Annotation TypeOrtholog
Chromosome Positionchr1:29900617-29903127 | Forward length=836
E-Value1.1E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3765345466473
Replicate 23.1382416180948
Replicate 32.7028147708725
Condition 2: 8 Hour
Replicate 11.8383957169942
Replicate 23.0857722261692
Replicate 33.3076315249109
Condition 3: 24 Hour
Replicate 13.954677183642
Replicate 22.5399099180389
Replicate 33.2614712592823


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140932.p1 GENE.S_Transcript_140932~~S_Transcript_140932.p1 ORF type:internal len:232 (-),score=44.09,PPR|PF01535.16|0.0066,PPR|PF01535.16|0.44,PPR|PF01535.16|0.00021,PPR|PF01535.16|17,PPR_2|PF13041.2|1.3e+02,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|0.00047,PPR_2|PF13041.2|8.4e-09,PPR_3|PF13812.2|17,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|0.0059,PPR_3|PF13812.2|8.7,PPR_1|PF12854.3|23,PPR_1|PF12854.3|5.7e+03,PPR_1|PF12854.3|11,PPR_1|PF12854.3|0.0043 S_Transcript_140932:2-694(-)
TTAGATGAGTCGGGTAGCCTTATTTGCTCTGGTAAGGGTGTTAGAACTGTTGAGCCTGGCCTCGATGACCATGTCATGTCTGGTGGGGTAAAGAAGCCACTTATGAATGCTTCAGCTGTTGCCAAGATGGTTGAGATAGTTAAGCGGTGGAAGTGGGGTCCGGAGATGGAAAGCCAGCTCGATAAGCTTCAGTTTGTACCCAATATGACTCATGTAATTCAGGCAATGAAAGTGATTAATGATGGTGAAATGTCGGTTAATTTGTTTCAATGGGCAAAGAGGCAACCTTGGTATGTACCTAATGATGAATGCTATTTGTTGTTGTTAGATGGGTTGAATAAGAACAGGGATACTGATAGGATGCAATCATTGTTTGATGAAATGATTGGTGATTCTGTTGATAATAATGGGATGTCTTCGTTTAGTGCATATAATCAAGTTATTCAGAATTTAGCTAAGGCAGAGAAGTTAGAGGTTTCGTTTTGTTGTTTTAAGAAGGTTCAGGAATCTGGTTTTAAGATTGAGACCCAGACGTATAATTATCTTATAACCTTGTTTTTGAATAAAGGTTTGCCTTACAAGGCGGTTGAGGTATATGAGAGTATGGAAGCGGCTGGGTGTTTATTGGATGTTTCGACATATGAGTTGATGATACCAAGCTTGGCGAAATCTGGTCGCCTTGATGCTGCCAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140932.p1 GENE.S_Transcript_140932~~S_Transcript_140932.p1 ORF type:internal len:232 (-),score=44.09,PPR|PF01535.16|0.0066,PPR|PF01535.16|0.44,PPR|PF01535.16|0.00021,PPR|PF01535.16|17,PPR_2|PF13041.2|1.3e+02,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|0.00047,PPR_2|PF13041.2|8.4e-09,PPR_3|PF13812.2|17,PPR_3|PF13812.2|1.9e+03,PPR_3|PF13812.2|0.0059,PPR_3|PF13812.2|8.7,PPR_1|PF12854.3|23,PPR_1|PF12854.3|5.7e+03,PPR_1|PF12854.3|11,PPR_1|PF12854.3|0.0043 S_Transcript_140932:2-694(-)
LDESGSLICSGKGVRTVEPGLDDHVMSGGVKKPLMNASAVAKMVEIVKRWKWGPEMESQLDKLQFVPNMTHVIQAMKVINDGEMSVNLFQWAKRQPWYVPNDECYLLLLDGLNKNRDTDRMQSLFDEMIGDSVDNNGMSSFSAYNQVIQNLAKAEKLEVSFCCFKKVQESGFKIETQTYNYLITLFLNKGLPYKAVEVYESMEAAGCLLDVSTYELMIPSLAKSGRLDAAR

Click here to download the sequence:
Link to NCBI Protein BLAST