Transcript Information: S_Transcript_140975.p1


Annotated TAIR IDAT1G14000.1
Annotated Gene NameVH1-interacting kinase
Annotated Gene Symbol(s)VIK
Annotation TypeOrtholog
Chromosome Positionchr1:4797606-4800043 | Forward length=438
E-Value4.5E-281
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 161.633291496929
Replicate 264.88465838051
Replicate 367.818970416513
Condition 2: 8 Hour
Replicate 148.660663360003
Replicate 251.811167645185
Replicate 345.877517458903
Condition 3: 24 Hour
Replicate 175.910970129815
Replicate 265.62203624606
Replicate 366.035898078849


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140975.p1 GENE.S_Transcript_140975~~S_Transcript_140975.p1 ORF type:complete len:440 (+),score=83.52,Pkinase_Tyr|PF07714.13|2.5e-65,Pkinase|PF00069.21|1.5e-57,Ank_4|PF13637.2|0.00012,Ank_4|PF13637.2|1.6e-06,Ank_2|PF12796.3|2.2e-06,Ank_2|PF12796.3|6.8e+02,Ank_5|PF13857.2|0.0032,Ank_5|PF13857.2|2.5,Ank_5|PF13857.2|9.1e+03,Ank|PF00023.26|1e-05,Ank|PF00023.26|1e+04,Ank|PF00023.26|1.6e+04,Ank|PF00023.26|1.6e+04,Ank_3|PF13606.2|8.6e-05,Ank_3|PF13606.2|7.9e+03 S_Transcript_140975:466-1785(+)
ATGAGCGACAGAGACAGTTCTTCGGAGAACAGCACGGCCTCGGCGGTGGAAGGAGGAGGATGTCCACCGGCGGCGCCAAAAGAGAAGCAGAAGGAGAAAGCGAGAGTGAGTAAAACGTCGGCGATATTATGGCATGCACATCAAAACGACGCCGGAGCAGTTAGGAAGCTTCTAGAAGAAGATCCGACGCTTGTGAATGCTAGAGATTATGATAATCGAACTCCTTTGCATGTTGCTTCTTTACATGGCTGGGTTGATGTTGCCAAATGCTTGATTGAGTTTGGTGCTGACGTCAACGCGCAAGATCGTTGGAAGAACACTCCTCTAGCTGATGCCGAAGGAGCAAAGAAACATGGAATGATCGAGCTGTTAAAGTCATATGGTGGCTTATCTTATGGACAAAATGGAAGCCATTTTGAGCCAAAGCCTGTTCCCCCTCCCCTGCCTAACAAATGTGACTGGGAAATTGACCCTGCTGAGCTGGACTTCTCACATTCTGCAATAATTGGGAAGGGCTCATTTGGTGAAATTTTGAAAGCCTACTGGCGAGGAACTCCTGTTGCAGTCAAACGAATACTTCCATCTCTTTCAGACGATAGACTGGTTATTCAGGATTTCAGGCATGAGGTCATCTTACTGGTGAAGCTTCGTCATCCAAATATCGTTCAGTTCCTCGGAGCCTGTACTGAAAAGAAGCCCTTGATGTTAATTACTGAATATCTGCGAGGGGGTGATCTACATCAGTACCTTAAAGAAAAGGGAGCCCTTAGTCCATCAACAGCTGTAAATTTTGCATTGGACATTGCAAGAGGAATGGCTTATCTTCACAATGAGCCTAATGTCATAATCCACCGAGATTTGAAACCAAGGAATGTTCTTTTAGTCAACTCCAATGCCGACCATTTAAAAGTTGGAGATTTTGGACTAAGCAAACTCATTAGGGTCCAACATGCACATGATGTGTACAAAATGACTGGCGAGACAGGAAGTTACCGATATATGGCTCCAGAGGTATTCAAGCATCGAAAGTATGACAAGAAGGTGGATGTTTTCTCGTTTGCCATGATATTGTATGAGATGCTTGAGGGAGATCCTCCCATGTCACATTATGAACCATATGAGGCAGCAAAATATGTTGCGGAAGGACACAGACCTCAATTTAGATCCAAAGGATTTACTCCTGAATTGAGAGAGTTGACTGAGCAGTGCTGGGCTGCTGACATAAACCAGAGGCCTTCATTCTTGGAGATACTTAAGAAACTCGAGAAAATAAAGGAAAATCTGCCAGCAGATCATCACTGGCACTTCTTTTCTGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140975.p1 GENE.S_Transcript_140975~~S_Transcript_140975.p1 ORF type:complete len:440 (+),score=83.52,Pkinase_Tyr|PF07714.13|2.5e-65,Pkinase|PF00069.21|1.5e-57,Ank_4|PF13637.2|0.00012,Ank_4|PF13637.2|1.6e-06,Ank_2|PF12796.3|2.2e-06,Ank_2|PF12796.3|6.8e+02,Ank_5|PF13857.2|0.0032,Ank_5|PF13857.2|2.5,Ank_5|PF13857.2|9.1e+03,Ank|PF00023.26|1e-05,Ank|PF00023.26|1e+04,Ank|PF00023.26|1.6e+04,Ank|PF00023.26|1.6e+04,Ank_3|PF13606.2|8.6e-05,Ank_3|PF13606.2|7.9e+03 S_Transcript_140975:466-1785(+)
MSDRDSSSENSTASAVEGGGCPPAAPKEKQKEKARVSKTSAILWHAHQNDAGAVRKLLEEDPTLVNARDYDNRTPLHVASLHGWVDVAKCLIEFGADVNAQDRWKNTPLADAEGAKKHGMIELLKSYGGLSYGQNGSHFEPKPVPPPLPNKCDWEIDPAELDFSHSAIIGKGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVILLVKLRHPNIVQFLGACTEKKPLMLITEYLRGGDLHQYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSNADHLKVGDFGLSKLIRVQHAHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGDPPMSHYEPYEAAKYVAEGHRPQFRSKGFTPELRELTEQCWAADINQRPSFLEILKKLEKIKENLPADHHWHFFSG*

Click here to download the sequence:
Link to NCBI Protein BLAST