Transcript Information: S_Transcript_141043.p1


Annotated TAIR IDAT3G53320.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37070.1); Has 11044 Blast hits to 5993 proteins in 551 species: Archae - 8; Bacteria - 1486; Metazoa - 4078; Fungi - 1814; Plants - 348; Viruses - 112; Other Eukaryotes - 3198 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19769397-19772278 | Reverse length=553
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.085611938498
Replicate 20.59142675970028
Replicate 31.0102664288219
Condition 2: 8 Hour
Replicate 10.91962638896727
Replicate 20.70400922292846
Replicate 31.4160877779533
Condition 3: 24 Hour
Replicate 10.68742640355017
Replicate 20.73961156659409
Replicate 30.61732276516018


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_141043.p1 GENE.S_Transcript_141043~~S_Transcript_141043.p1 ORF type:complete len:858 (+),score=210.41 S_Transcript_141043:117-2690(+)
ATGGAAGATCTCGGTGAACAGTCTCAGTTAGTCGAAGAAAAAACTAATGATTTCTCTCTCATCGATGTTTCTGGTTCCGATGATGATTTCCTCTTGGCTTATTCTTCAGAGGTCAACATAGTGGATAATCCAGGTGATGCTCCTGCTCAAGGAGCACATACAAACAAACATTCTGATTCACAAAACCCAAAGAAAAATGGCAAGTGGAACCTGCGAAAAAGCTTGGCCTGGGATAGTGCCTTCTTTACCAGTGCAGGGGTTCTTGATCCTGAGGAGTTGTCTACCATAATTGAAGGAGCTGAAACCACTGCAACACAGAAGCCAACTTTACCTGGAATCCAAGAGGATTTAAGCAAATCAACTGATTCAATTTCCACATTTGAGAGTGATTTGACTCTGGAAAGCCTGGAGGCTGATCTTTTCTGTGATATAAGACCATCAATCCAGCGGTCCAGTAGGTCTTGCAACCCGGGAAATAGCAAAAGCACTAAAATACTTGAAGGAGACTCCACTAACAGATGCTTGCCGAAGATAATTGAATCTCCAACGGGCAATGTGCTGAAGCCTGAATTGGCCTCCAGGAAGCTTAATTCTGGTGTACAGGGACCCGGGAAATCATTAAAGCCAGCTGGTTCTATTTGCAAACAAGTGCCAAAGCCTGCTCTGAGGAACAAAGAGTTGAGCTCATTGCTTCCTCGACATCCTGCTGCAGCTGAAAAATCAAGTCTTGCTGGAGGTGCAGCAACCAAGAGGATGTCAGTTGGTGCTGGCCGTGTCAAATTAGAAAGTAGTGCTGCTGGAAATCCAAAGGATGTAAGAGTTGCAGGAAGAGGAGCTCCTTTACCGAAAGTTTCCTATCAAGCTGGCTCAAAGAAAACTGCACCGAAACCTGTGTCTGTGTCCAAATATTCTTCAGGCTCTACAATTTTGAGTAGATCAGCTATACGCTGTTCTCGTTCTTCATGTGACAGCTCTGGTAGTTCTTCATCTCAAAATATCCGTAAATCTCAAGCTGATATTATCAGAAAAAAGATGGACAATGTTGTCAATTTGCCATATGGTTCCAAAGCCAGAACTTCGTCCAGAGTTACTGCAAAGAGTAAATCTCAGACTCAGGACTCAAACATCTCAGAGTTTTTGAAGTTTGCATCAAAGCTCTCTCCCAGTGTTTCTCCGGCAAGCCCTATCAGTGAGTGGTCCACAGAATCATCCTCATCAACTGCTACATTTAATCAGCATCATGTTTCTTTGGAACCTTGCCCCGACTCCTCGGAAGATGTTTCAGTGGACTGGACTTCTCAAGACTCTCAGAATCGTTTGAGAAGTAAAGGATTTGGTGGACATGAAAATAGAGTAGTGAGATTGCCGAGCCAATCTGCGAAGCCACCTTCAACGGGGATTGCTGCCCCCCTTGCTCGTCCAGGTTCTGCTAAACCATCGGGTCTTCGGATGCCATCAGCAAAAATTGGTTTCTTTGATGGGGTAAAACCTGGCACCAAGACACCAAGCAGCAATTCACGATCTCGTGCTGCTGTGCCTACTAACCTACCTAGGTTGGCAGCAGCAAGCTGTAGCCCTTGTGGGGCTGCAAACAAGACTAAACTTGGGAATACTAAGACTGCTGCTAAAGTGACTCCAACGATATCTGGAATTGCCTCACCTGAATTCTACAGGACTGATGTTGATATCACATCAGCTGTACATTTACTTGACCAGTCAAGTTGTTTGCAAAAGGCTTCAAGTGCTTATAATATTTCTAGGTCTTCATGTGAACTACTGGAAGGTGTTTTACCTGACTCTGCAATTGACAAAATTGGTATTGTTGTTGAAGTAGTTGAAGAAGAGAAATATACTGATGATTCTGGTTCAGGGGCTAGGAACAACAACTTAATTCCTTTGAAGAAAGAAGCAAGCACAGCAGGGAAATTGCACTCAACAAGTGACCAGGCAATATTTACTGCAGAAGAAGGATATAAAGTCTTGGACATAACTGATTGCACAAGAGACCTCAGTGCTAGTCCATCTTCTAAAACAAGTGAAAGAAATAGGAGTGAGTGGGTCAATGTTGACAATCTCAATCCACCTCAAGTAGTCAGTGAAGCTGATGATCTTAAAGATGTCAGCATTCATGCGTGCCAGGAGGTAAGTGGAAGTGCGAGGCATGAGAATCAAGATTCAAATCCTCAGACATTAGACCCAGTGCAAAATGTTTGTGTTGAAAATCAGGTAGGCGGGGAGGAGAAGCATGTGGGAGGTATAGACCATACCACAGAATTGCAGAGAGATCGAGATGGTGATTTTCAGTCTCAAAGTGTTATTGGTAATGTAAACAATTCTTCTGCCATCATATTATGTCCTGACAAACAAAATGAGAGCCCTACAAACCTCATGCTATCTTATCCTACTTTGTCCCATTTAGAGCCCAGTCTGGTGTCAAGGACTCCTTTCACAGTAAAGAATTCTGTATGTGATGTGATTGACAGCTGCTACCCATCATCAGTTTCAGTAGTTGAACCATTGGTGAAAGCCGACACCTTACCTTCCCTGTTGGATGTTCAAAAGGAAAATACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_141043.p1 GENE.S_Transcript_141043~~S_Transcript_141043.p1 ORF type:complete len:858 (+),score=210.41 S_Transcript_141043:117-2690(+)
MEDLGEQSQLVEEKTNDFSLIDVSGSDDDFLLAYSSEVNIVDNPGDAPAQGAHTNKHSDSQNPKKNGKWNLRKSLAWDSAFFTSAGVLDPEELSTIIEGAETTATQKPTLPGIQEDLSKSTDSISTFESDLTLESLEADLFCDIRPSIQRSSRSCNPGNSKSTKILEGDSTNRCLPKIIESPTGNVLKPELASRKLNSGVQGPGKSLKPAGSICKQVPKPALRNKELSSLLPRHPAAAEKSSLAGGAATKRMSVGAGRVKLESSAAGNPKDVRVAGRGAPLPKVSYQAGSKKTAPKPVSVSKYSSGSTILSRSAIRCSRSSCDSSGSSSSQNIRKSQADIIRKKMDNVVNLPYGSKARTSSRVTAKSKSQTQDSNISEFLKFASKLSPSVSPASPISEWSTESSSSTATFNQHHVSLEPCPDSSEDVSVDWTSQDSQNRLRSKGFGGHENRVVRLPSQSAKPPSTGIAAPLARPGSAKPSGLRMPSAKIGFFDGVKPGTKTPSSNSRSRAAVPTNLPRLAAASCSPCGAANKTKLGNTKTAAKVTPTISGIASPEFYRTDVDITSAVHLLDQSSCLQKASSAYNISRSSCELLEGVLPDSAIDKIGIVVEVVEEEKYTDDSGSGARNNNLIPLKKEASTAGKLHSTSDQAIFTAEEGYKVLDITDCTRDLSASPSSKTSERNRSEWVNVDNLNPPQVVSEADDLKDVSIHACQEVSGSARHENQDSNPQTLDPVQNVCVENQVGGEEKHVGGIDHTTELQRDRDGDFQSQSVIGNVNNSSAIILCPDKQNESPTNLMLSYPTLSHLEPSLVSRTPFTVKNSVCDVIDSCYPSSVSVVEPLVKADTLPSLLDVQKENT*

Click here to download the sequence:
Link to NCBI Protein BLAST