Transcript Information: S_Transcript_141053.p1


Annotated TAIR IDAT3G53320.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37070.1); Has 11044 Blast hits to 5993 proteins in 551 species: Archae - 8; Bacteria - 1486; Metazoa - 4078; Fungi - 1814; Plants - 348; Viruses - 112; Other Eukaryotes - 3198 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19769397-19772278 | Reverse length=553
E-Value4.8E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.067204548573688
Replicate 20.11142823008846
Replicate 30.13971769760304
Condition 2: 8 Hour
Replicate 10.29618597662685
Replicate 20.39546197090426
Replicate 30.26913948996189
Condition 3: 24 Hour
Replicate 10.33098308319082
Replicate 20.20031146595256
Replicate 30.095538046989076


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_141053.p1 GENE.S_Transcript_141053~~S_Transcript_141053.p1 ORF type:complete len:792 (+),score=197.85 S_Transcript_141053:118-2493(+)
ATGGAAGATCTCGGTGAAACGTCTCAGTTAGTCGATGAAAAAACTAATGATTTCTCTCTCATCGATGTTTCTGGTTCCGATGATGATTTCCTCTTGGCTTATTCTTCAGAGGTCAACATAGTGGATAATCCAGGTGATGCTCCTGCTCAAGGAGCACATACAAACAAACATTCTGATTCACAAAACCCAAAGAAAAATGGCAAGTGGAACCTGCGAAAAAGCTTGGCCTGGGATAGTGCCTTCTTTACCAGTGCAGGGGTTCTTGATCCTGAGGAGTTGTCTACCATAATTGAAGGAGCTGAAACCACTGCAACACAGAAGCCAACTTTACCTGGAATCCAAGAGGATTTAAGCAAATCAACTGATTCAATTTCCACATTTGAGAGTGATTTGACTCTGGAAAGCCTGGAGGCTGATCTTTTCTGTGATATAAGACCATCAATCCAGCGGTCCAGTAGGTCTTGCAACCCGGGAAATAGCAAAAGCACTAAAATACTTGAAGGAGACTCCACTAACAGATGCTTGCCGAAGATAATTGAATCTCCAACGGGCAATGTGCTGAAGCCTGAATTGGCCTCCAGGAAGCTTAATTCTGGTGTACAGGGACCCGGGAAATCATTAAAGCCAGCTGGTTCTATTTGCAAACAAGTGCCAAAGCCTGCTCTGAGGAACAAAGAGTTGAGCTCATTGCTTCCTCGACATCCTGCTGCAGCTGAAAAATCAAGTCTTGCTGGAGGTGCAGCAACCAAGAGGATGTCAGTTGGTGCTGGCCGTGTCAAATTAGAAAGTAGTGCTGCTGGAAATCCAAAGGGAAGAGGAGCTCCTTTGCCGAAAGTTTCCTATCAAGCTGACTCAAAGAAAACTGCACCAAAACCTGTGTCTGTGTCCAAATATTCTTCAGGCTCTACAATTTTGAGTAGATCAGCTATACGCTGTTCTCGTTCTTCATGTGACAGCTCTGGTAGTTCTTCATCTCAAAATATCCGTAAATCTCAAGCTGATATTATCAGAAAAAAGATGGACAATGTTGTCAATTTGCCATATGGTTCCAAAGCCAGAACTTCGTCCAGAGTTACTGCAAAGAGTAAATCTCAGACTCAGGACTCAAACATCTCAGAGTTTTTGAAGTTTGCATCAAAGCTCTCTCCCAGTGTTTCTCCGGCAAGCCCTATCAGTGAGTGGTCCACAGAATCATCCTCATCAACTGCTACATTTAATCAGCATCATGTTTCTTTGGAACCTTGCCCCGACTCCTCGGAAGATGTTTCAGTGGACTGGACTTCTCAAGACTCTCAGAATCGTTTGAGAAGTAAAGGATTTGGTGGACATGAAAATAGAGTAGTGAGATTGCCGAGCCAATCTGCGAAGCCACCTTCAACGGGGATTGCTGCCCCCCTTGCTCGTCCAGGTTCTGCTAAACCATCGGGTCTTCGGATGCCATCAGCAAAAATTGGTTTCTTTGATGGGGTAAAACCTGGCACCAAGACACCAAGCAGCAATTCACGATCTCGTGCTGCTGAGCCTACTAACCCACCTAGGTTGGCAGCAGCATGCTGTAGCTCATTTGGGGCTGCAAACAAGACTAAACTTGGGAATACTAAGACCGCTGCTAAAGTGACTCCAACAGTATCTGGAATTGCCTCACCTGAACTCTACAGGACTGATGTTGATATCACATCAGCTGTACATTTACTTGACCAGTCAAGTTGTTTGCAAAAGGCTTCAAGTGCTTATAATATTTCTAGGTCTTCATGTGAACTACTGGAAGGGGCTAGGAACAACAGCAACTTAATTCCTTTGAAGAAAGAAGCAAGCACAGCAGGGAAATTGCACTCAACAAGTGACCAGGCAATATTTACTGCAGAAGAAGGATATAAAGTCTTGGACATAACTGATTGCACAAGAGACCTCAGTGCTACTCCATCTTCTAAAACAATTGAAAGAAATATGAGTGAGTGGGTCAATGTTGACAATCTCAATCCACCTCAAGTAGTCAGTGAAGCTGATGATCTTAAAGATGTCAGCATTCATGCGTGCCAGGAGGTAAGTGGAAGTGCGAGGCATGAGAATCAAGATTCAAATCCTCAGACATTAGACCCAGTGCAAAATGTTTGTGTTGAAAATCAGGTAGGCGGGGAGGAGAAGCATGTGGGAGGTATAGACCATACCACAGAATTGCAGAGAGATCGAGATGGTGATTTTCAGTCTCAAAATGTTATTGAGCCCAGTCTGGTGTCAAGGACTCCTTTCACAGTAAAGAATTCTGTATGTGATGTGATTGACAGCTGCTACCCATCATCAGTTTCAGTAGTTGAACCATTGGTGAAAGCCGACACCCTACCTTCCCTGTTGGATGCTCAGAAGGAAAATACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_141053.p1 GENE.S_Transcript_141053~~S_Transcript_141053.p1 ORF type:complete len:792 (+),score=197.85 S_Transcript_141053:118-2493(+)
MEDLGETSQLVDEKTNDFSLIDVSGSDDDFLLAYSSEVNIVDNPGDAPAQGAHTNKHSDSQNPKKNGKWNLRKSLAWDSAFFTSAGVLDPEELSTIIEGAETTATQKPTLPGIQEDLSKSTDSISTFESDLTLESLEADLFCDIRPSIQRSSRSCNPGNSKSTKILEGDSTNRCLPKIIESPTGNVLKPELASRKLNSGVQGPGKSLKPAGSICKQVPKPALRNKELSSLLPRHPAAAEKSSLAGGAATKRMSVGAGRVKLESSAAGNPKGRGAPLPKVSYQADSKKTAPKPVSVSKYSSGSTILSRSAIRCSRSSCDSSGSSSSQNIRKSQADIIRKKMDNVVNLPYGSKARTSSRVTAKSKSQTQDSNISEFLKFASKLSPSVSPASPISEWSTESSSSTATFNQHHVSLEPCPDSSEDVSVDWTSQDSQNRLRSKGFGGHENRVVRLPSQSAKPPSTGIAAPLARPGSAKPSGLRMPSAKIGFFDGVKPGTKTPSSNSRSRAAEPTNPPRLAAACCSSFGAANKTKLGNTKTAAKVTPTVSGIASPELYRTDVDITSAVHLLDQSSCLQKASSAYNISRSSCELLEGARNNSNLIPLKKEASTAGKLHSTSDQAIFTAEEGYKVLDITDCTRDLSATPSSKTIERNMSEWVNVDNLNPPQVVSEADDLKDVSIHACQEVSGSARHENQDSNPQTLDPVQNVCVENQVGGEEKHVGGIDHTTELQRDRDGDFQSQNVIEPSLVSRTPFTVKNSVCDVIDSCYPSSVSVVEPLVKADTLPSLLDAQKENT*

Click here to download the sequence:
Link to NCBI Protein BLAST