Transcript Information: S_Transcript_14129.p1


Annotated TAIR IDAT2G03670.1
Annotated Gene Namecell division cycle 48B
Annotated Gene Symbol(s)CDC48B
Annotation TypeOrtholog
Chromosome Positionchr2:1117595-1120361 | Forward length=603
E-Value3.4E-284
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4022917342886
Replicate 27.0863926724468
Replicate 37.1755678470963
Condition 2: 8 Hour
Replicate 18.3677442138419
Replicate 26.8523046330288
Replicate 36.1053669464599
Condition 3: 24 Hour
Replicate 16.2568954368755
Replicate 25.8160443614799
Replicate 36.4307861562713


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_14129.p1 GENE.S_Transcript_14129~~S_Transcript_14129.p1 ORF type:complete len:604 (+),score=139.26,AAA|PF00004.25|9.2e-36,AAA|PF00004.25|6.3e-38,AAA_16|PF13191.2|3e-06,AAA_16|PF13191.2|1.5e-05,AAA_5|PF07728.10|0.0011,AAA_5|PF07728.10|0.0072,RuvB_N|PF05496.8|0.0061,RuvB_N|PF05496.8|0.0022,RuvB_N|PF05496.8|3.4e+02,AAA_33|PF13671.2|0.00016,AAA_33|PF13671.2|0.032,AAA_33|PF13671.2|7.6e+03,AAA_19|PF13245.2|0.0019,AAA_19|PF13245.2|0.018,AAA_19|PF13245.2|2.1e+02,AAA_22|PF13401.2|0.0037,AAA_22|PF13401.2|0.4,AAA_22|PF13401.2|9.4e+02,TIP49|PF06068.9|0.28,TIP49|PF06068.9|1.1e-05,AAA_17|PF13207.2|0.022,AAA_17|PF13207.2|0.016,Viral_helicase1|PF01443.14|0.00079,Viral_helicase1|PF01443.14|0.14,AAA_2|PF07724.10|0.00031,AAA_2|PF07724.10|4.3,AAA_25|PF13481.2|0.0012,AAA_25|PF13481.2|1.3,TsaE|PF02367.13|0.0042,TsaE|PF02367.13|2 S_Transcript_14129:70-1881(+)
ATGGAGAGCAGTACCAGCAGCAATGAAACAACGAATTGGAAGGCTGAAGAAGCCATTGCTGGAAGCTCTGAAGCTCTCAAAGCTCTCAGAGAACTCGTTATATGGCCTTTGCTCTACTCTCGCGAAGCACAACTCCTTGGTCTCCAATGGCCTCGTGGATTGCTTCTCTATGGTCCTCCCGGTACTGGCAAGACGAGCTTGGTGCGTGCGGTGGTCAGGGAAGGTGATGCCAAGCTAACAGTTGTTAGTCCACATACTGTCCTCAGAGCACATGTTGGAGAAAGTGAGAAAGCCCTCCGTCGAGCATTTTCAGAGGCATCATCTCATGCATTGTCAGGCAAGCCTTCAGTTGTCTTTATTGATGAGATTGATGCTGTCTGCCCTCGTCGTGATTCGAGAAGAGAACAAGAAGCTCGTTTGACCTCTCAGTTGCTTACACTAATGGATTCAATTAAGTCTTCAACAACTGCTCCACATTTTGTAGTTGTGGCATCAACTAACAGGATTGAAGCTCTTGACCCAGCACTGAGAAGATCTGGGCGATTTGATGCAGAAATTGAGGTCACAACTCCTAATGAGAGTGAACGTTTAGAAATACTAATGCTGTACACTAGGAACCTTCCACTTGACCCAGATGTTGATCTGCAAGCTATAGCTGCCTCATGTAATGGCTACGTGGGGGCTGATTTGGAAGCGTTATGCCGTGAGGCAGCCTTGTCTGCCATGAAAGATGAAGGTGATTGGTGGGTAAAGATAGACGACTGGAAACGTGCACGGGCTGTCATTGGTCCTAGCATAACTAGAGGTGTCACCGTGGAAATCCCTAAGGTGTCTTGGGAGGAGATTGGAGGCCTAAATGAATTAAAGAGGAAGCTTCAGCGGGCTGTGGAGTGGCCTATTAAACATTCTGCTGCCTTTAAAAAGATGGGTATATCTCCCTTCCGTGGGATTCTTCTGCATGGACCTCCAGGATGCTCAAAAACCACCCTTGCCAAAGCTGTTGCCCATGCTGCTCAAGCTTCCTTTTTCTCACTAAGTGGTGCAGAATTATATTCAATGTATGTTGGAGAGGGTGAGGCTTTGTTGCGGAATACATTCCGGAGAGCCCGGCTTGCAGCACCAAGCATCTTATTCTTTGACGAAGCAGATGTTGTTGCGGCAAAGAGAGTTAAGAGTGGCGGGAGTTCAAGTGGTAGTGCTTCAGTTGGGGAGAGGCTCCTCTCAACATTGCTGACTGAAATGGATGGTCTGGAGCAGACAAAAGGAATACTCGTCTTGGCTGCCACAAATCGAGCTGAGGCAATTGATGCTGCCCTTATGCGTCCAGGGCGCTTTGATTTGGTGCTCTATGTGCCACCTCCAGATCTGGAAGGGCGATATGAGATACTTCGAGTACATACAAGGAATATGAAACTGGGACCTGATGTTGATCTTAAACAAACAGCAAAGGATACTCAGCTTTTTACAGGGGCTGAACTGGAGGGTCTATGTAGAGAAGCTGGAATTGTTGCTTTGAGAGAGGACATGAATGCAACCATTGTATGCGATCGACATTTCCAAACAGTAAGAGAATCACTGAAGCCTGCATTAACAAGGGAAATAATTGAAAAGTACTCTAGTTTCATGAATAAATCGTCTCCCAAGGTTCATGTTACCCAGCCCACTGCCGTGCTACGCAGCAAATGCACACCAAAGCTCTCTGTTTCTTCGAGTGCAGTCACAATAGGTATTGTAAGCTTGTTGACAGTTTTTGCTGCCACATATTTGCCCTGGCATATAGATCGGAGTGGGACTAGAGCATCAGCCACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_14129.p1 GENE.S_Transcript_14129~~S_Transcript_14129.p1 ORF type:complete len:604 (+),score=139.26,AAA|PF00004.25|9.2e-36,AAA|PF00004.25|6.3e-38,AAA_16|PF13191.2|3e-06,AAA_16|PF13191.2|1.5e-05,AAA_5|PF07728.10|0.0011,AAA_5|PF07728.10|0.0072,RuvB_N|PF05496.8|0.0061,RuvB_N|PF05496.8|0.0022,RuvB_N|PF05496.8|3.4e+02,AAA_33|PF13671.2|0.00016,AAA_33|PF13671.2|0.032,AAA_33|PF13671.2|7.6e+03,AAA_19|PF13245.2|0.0019,AAA_19|PF13245.2|0.018,AAA_19|PF13245.2|2.1e+02,AAA_22|PF13401.2|0.0037,AAA_22|PF13401.2|0.4,AAA_22|PF13401.2|9.4e+02,TIP49|PF06068.9|0.28,TIP49|PF06068.9|1.1e-05,AAA_17|PF13207.2|0.022,AAA_17|PF13207.2|0.016,Viral_helicase1|PF01443.14|0.00079,Viral_helicase1|PF01443.14|0.14,AAA_2|PF07724.10|0.00031,AAA_2|PF07724.10|4.3,AAA_25|PF13481.2|0.0012,AAA_25|PF13481.2|1.3,TsaE|PF02367.13|0.0042,TsaE|PF02367.13|2 S_Transcript_14129:70-1881(+)
MESSTSSNETTNWKAEEAIAGSSEALKALRELVIWPLLYSREAQLLGLQWPRGLLLYGPPGTGKTSLVRAVVREGDAKLTVVSPHTVLRAHVGESEKALRRAFSEASSHALSGKPSVVFIDEIDAVCPRRDSRREQEARLTSQLLTLMDSIKSSTTAPHFVVVASTNRIEALDPALRRSGRFDAEIEVTTPNESERLEILMLYTRNLPLDPDVDLQAIAASCNGYVGADLEALCREAALSAMKDEGDWWVKIDDWKRARAVIGPSITRGVTVEIPKVSWEEIGGLNELKRKLQRAVEWPIKHSAAFKKMGISPFRGILLHGPPGCSKTTLAKAVAHAAQASFFSLSGAELYSMYVGEGEALLRNTFRRARLAAPSILFFDEADVVAAKRVKSGGSSSGSASVGERLLSTLLTEMDGLEQTKGILVLAATNRAEAIDAALMRPGRFDLVLYVPPPDLEGRYEILRVHTRNMKLGPDVDLKQTAKDTQLFTGAELEGLCREAGIVALREDMNATIVCDRHFQTVRESLKPALTREIIEKYSSFMNKSSPKVHVTQPTAVLRSKCTPKLSVSSSAVTIGIVSLLTVFAATYLPWHIDRSGTRASAT*

Click here to download the sequence:
Link to NCBI Protein BLAST