Transcript Information: S_Transcript_14133.p1


Annotated TAIR IDAT2G03670.1
Annotated Gene Namecell division cycle 48B
Annotated Gene Symbol(s)CDC48B
Annotation TypeOrtholog
Chromosome Positionchr2:1117595-1120361 | Forward length=603
E-Value3.4E-282
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2658815742808
Replicate 22.0994641148219
Replicate 32.1244554086284
Condition 2: 8 Hour
Replicate 11.4952694379292
Replicate 22.0541764193405
Replicate 32.1707290549313
Condition 3: 24 Hour
Replicate 11.8599149549588
Replicate 22.5350173215614
Replicate 32.1895597814124


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_14133.p1 GENE.S_Transcript_14133~~S_Transcript_14133.p1 ORF type:complete len:599 (+),score=133.03,AAA|PF00004.25|9.1e-36,AAA|PF00004.25|6.2e-38,AAA_16|PF13191.2|3.1e-06,AAA_16|PF13191.2|1.7e-05,AAA_5|PF07728.10|0.001,AAA_5|PF07728.10|0.0071,RuvB_N|PF05496.8|0.0059,RuvB_N|PF05496.8|0.0022,RuvB_N|PF05496.8|3.3e+02,AAA_19|PF13245.2|0.0019,AAA_19|PF13245.2|0.017,AAA_19|PF13245.2|2e+02,AAA_33|PF13671.2|0.00016,AAA_33|PF13671.2|0.032,AAA_22|PF13401.2|0.0037,AAA_22|PF13401.2|0.39,AAA_22|PF13401.2|9.3e+02,TIP49|PF06068.9|0.28,TIP49|PF06068.9|1e-05,AAA_17|PF13207.2|0.022,AAA_17|PF13207.2|0.016,Viral_helicase1|PF01443.14|0.00078,Viral_helicase1|PF01443.14|0.14,AAA_2|PF07724.10|0.00031,AAA_2|PF07724.10|4.3,AAA_25|PF13481.2|0.0012,AAA_25|PF13481.2|1.3,TsaE|PF02367.13|0.0042,TsaE|PF02367.13|2.2 S_Transcript_14133:70-1866(+)
ATGGAGAGCAGTACCAGCAGCAATGAAACAACGAATTGGAAGGCTGAAGAAGCCATTGCTGGAAGCTCTGAAGCTCTCAAAGCTCTCAGAGAACTCGTTATATGGCCTTTGCTCTACTCTCGCGAAGCACAACTCCTTGGTCTCCAATGGCCTCGTGGATTGCTTCTCTATGGTCCTCCCGGTACTGGCAAGACGAGCTTGGTGCGTGCGGTGGTCAGGGAAGGTGATGCCAAGCTAACAGTTGTTAGTCCACATACTGTCCTCAGAGCACATGTTGGAGAAAGTGAGAAAGCCCTCCGTCGAGCATTTTCAGAGGCATCATCTCATGCATTGTCAGGCAAGCCTTCAGTTGTCTTTATTGATGAGATTGATGCTGTCTGCCCTCGTCGTGATTCGAGAAGAGAACAAGAAGCTCGTTTGACCTCTCAGTTGCTTACACTAATGGATTCAATTAAGTCTTCAACAACTGCTCCACATTTTGTAGTTGTGGCATCAACTAACAGGATTGAAGCTCTTGATCCAGCACTGAGAAGATCTGGACGATTTGATGCTGAAATTGAGGTCACAACTCCTAACGAGAGTGAGCGTTTAGAAATACTAATGCTGTATTCTAGGAACCTTCCCCTTGACCCTGATGTTGATCTGCAAGCAATAGCTGCCTCATGTAATGGCTACGTGGGGGCTGATTTGGAAGCGTTATGCCGTGAGGCAGCCTTGTCTGCTATGAAAGATGAAGGTGATTGGCGGGTAAAAATGGACGACTGGAAACATGCACGGGCTGTCATTGGTCCTAGCATAACTAGAGGTGTCACCGTGGAAATCCCTAAGGTGTCTTGGGACGATATTGGAGGCCTAAATGACTTAAAGAGAAAGCTTCGCCAGGCTGTGGAGTGGCCCATTAAACATTCTGCTGCCTTTAAAAAGATGGGTATATCTCCCTTCCGTGGGATTCTTCTGCATGGACCTCCAGGATGCTCAAAAACCACCCTTGCCAAAGCTGTTGCCCATGCTGCTCAAGCTTCCTTTTTCTCACTAAGTGGTGCAGAATTATATTCAATGTATGTTGGAGAGGGTGAGGCTTTGTTGCGGAATACATTCCGGAGAGCCCGGCTTGCAGCACCAAGCATCTTATTCTTTGACGAAGCAGATGTTGTTGCGGCAAAGAGAGTTAAGAGTGGCGGGAGTTCAAGTGGTAGTGCTTCAGTTGGGGAGAGGCTCCTCTCAACATTGCTGACTGAAATGGATGGTCTGGAGCAGACAAAAGGAATACTCGTCTTGGCTGCCACAAATCGAGCTGAGGCAATTGATGCTGCCCTTATGCGTCCAGGGCGCTTTGATTTGGTGCTCTATGTGCCACCTCCAGATCTGGAAGGGCGATATGAGATACTTCGAGTACATACAAGGAATATGAAACTGGGACCTGATGTTGATCTTAAACAAACAGCAAAGGATACTCAGCTTTTTACAGGGGCTGAACTGGAGGGTCTATGTAGAGAAGCTGGAATTGTTGCTTTGAGAGAGGACATGAATGCAACCATTGTATGCGATCGACATTTCCAAATAGTTCGAGGATCACTAAAACCTGCATTAACAAGAGAAATAATTGAAAAGTACTCTAGTTTCATGAATAAATCGTCTCCCAAGGTTCATGTTACCCAGCCCACTGCCGTGCTACGCAGCAAATGCACACCAAAGCTCTCTGTTTTCTTCGACTGCAGTCACAATAGGTATGGTAAGCTTGTTGACAGTTTTTGCTGCCACATATTTGCCCTGGCATATAGATCGGAGTGGGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_14133.p1 GENE.S_Transcript_14133~~S_Transcript_14133.p1 ORF type:complete len:599 (+),score=133.03,AAA|PF00004.25|9.1e-36,AAA|PF00004.25|6.2e-38,AAA_16|PF13191.2|3.1e-06,AAA_16|PF13191.2|1.7e-05,AAA_5|PF07728.10|0.001,AAA_5|PF07728.10|0.0071,RuvB_N|PF05496.8|0.0059,RuvB_N|PF05496.8|0.0022,RuvB_N|PF05496.8|3.3e+02,AAA_19|PF13245.2|0.0019,AAA_19|PF13245.2|0.017,AAA_19|PF13245.2|2e+02,AAA_33|PF13671.2|0.00016,AAA_33|PF13671.2|0.032,AAA_22|PF13401.2|0.0037,AAA_22|PF13401.2|0.39,AAA_22|PF13401.2|9.3e+02,TIP49|PF06068.9|0.28,TIP49|PF06068.9|1e-05,AAA_17|PF13207.2|0.022,AAA_17|PF13207.2|0.016,Viral_helicase1|PF01443.14|0.00078,Viral_helicase1|PF01443.14|0.14,AAA_2|PF07724.10|0.00031,AAA_2|PF07724.10|4.3,AAA_25|PF13481.2|0.0012,AAA_25|PF13481.2|1.3,TsaE|PF02367.13|0.0042,TsaE|PF02367.13|2.2 S_Transcript_14133:70-1866(+)
MESSTSSNETTNWKAEEAIAGSSEALKALRELVIWPLLYSREAQLLGLQWPRGLLLYGPPGTGKTSLVRAVVREGDAKLTVVSPHTVLRAHVGESEKALRRAFSEASSHALSGKPSVVFIDEIDAVCPRRDSRREQEARLTSQLLTLMDSIKSSTTAPHFVVVASTNRIEALDPALRRSGRFDAEIEVTTPNESERLEILMLYSRNLPLDPDVDLQAIAASCNGYVGADLEALCREAALSAMKDEGDWRVKMDDWKHARAVIGPSITRGVTVEIPKVSWDDIGGLNDLKRKLRQAVEWPIKHSAAFKKMGISPFRGILLHGPPGCSKTTLAKAVAHAAQASFFSLSGAELYSMYVGEGEALLRNTFRRARLAAPSILFFDEADVVAAKRVKSGGSSSGSASVGERLLSTLLTEMDGLEQTKGILVLAATNRAEAIDAALMRPGRFDLVLYVPPPDLEGRYEILRVHTRNMKLGPDVDLKQTAKDTQLFTGAELEGLCREAGIVALREDMNATIVCDRHFQIVRGSLKPALTREIIEKYSSFMNKSSPKVHVTQPTAVLRSKCTPKLSVFFDCSHNRYGKLVDSFCCHIFALAYRSEWD*

Click here to download the sequence:
Link to NCBI Protein BLAST