Transcript Information: S_Transcript_14168.p1


Annotated TAIR IDAT4G11820.2
Annotated Gene Namehydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase
Annotated Gene Symbol(s)MVA1, FKP1
Annotation TypeOrtholog
Chromosome Positionchr4:7109124-7111901 | Reverse length=461
E-Value5.1E-287
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.984926478958
Replicate 230.950829557512
Replicate 325.247809825678
Condition 2: 8 Hour
Replicate 123.188035817203
Replicate 219.420838302223
Replicate 321.96178238089
Condition 3: 24 Hour
Replicate 122.234275353172
Replicate 225.410940252268
Replicate 328.234302827831


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_14168.p1 GENE.S_Transcript_14168~~S_Transcript_14168.p1 ORF type:5prime_partial len:561 (+),score=99.58,HMG_CoA_synt_C|PF08540.6|1.1e-116,HMG_CoA_synt_N|PF01154.13|6e-82 S_Transcript_14168:1-1683(+)
AGGAGTTTAGTTTTTAGTCACATAATAAATGGGGAGGAAGGAGGGAGTCTATATATACACCGTGTTCCCCCAACGGAATTCCCCCAAAACCAAAACCCAAAATTCCTCTACTCTCTTCTCTTCTCTTCTCTCCTCTCATCTACCCACCCCCTGATTGCTCTGCTGGACCTCCCGTATTCTCTCTCTCTCTCCCCATCTAATTTTTACTATCAGCTGTCGTTGTCACCGAGGTATCCTCTCCAAGAAAACATCTTTGATCTATTTGTCATCAACTTAACAATGGCCAAGAATGTGGGAATTCTTGCTCTTCAAATCTACTTCCCCCCTACCTCTGTTCAACAGGAAGCATTGGAGGTTCATGATGGAGTTAGCAAAGGGAAATACACCATTGGACTTGGACAAGACTGCATGGCGTTTTGTACCGAGGTTGAAGACATCATCTCCATGAGTTTGACAGCTGTGACATCACTCCTTGAGAAATATCAGATTGATCCGAAACAAATTGGTCGTCTGGAAGTAGGAAGTGAGACTGTCTTAGATAAGAGCAAATCTATCAAGACATTCTTGATGCAAATATTTGAGGAGCATGGAAATACAGACATTGAAGGTGTTGACTCGACCAATGCATGCTATGGAGGAACTGCTGCATTATTTAACTGTGTGAATTGGGTGGAGAGCAGTTCATGGGATGGACGTTATGGTCTGGTTGTATGTACAGACAGTGCGGTCTATGCTGAGGGACCAGCTCGTCCCACTGGAGGGGCTGCCGCTATTGCGATGCTCGTGGGGCCAGATGCTCCCATTGCTTTTGAAAGCAAATTGAGGGGCAGTCATATGGCTCATGCTTATGACTTTTACAAGCCCAACTTAGCTAGTGAATACCCAGTTGTTGACGGGAAGTTGTCACAAACTTGTTACCTCATGGCAGTTGATTCTTGCTACAAACACTTCTGCAGCAAGTATGAGAAGTTTGAAGGTAAGCAATTCTCCATCAACGATGCCGACTATGTTGTGTTCCATTCTCCTTACAACAAGCTAGTGCAAAAGAGCTTTGCCCGATTAATGTACAATGATTTCTTGAGGAATGCCAGCTCCATCAATGAAGAGGCTAAGGAGAAGCTGTCCCCATTTTCTAACCTATCTAGCGATGAAAGCTACCAAAGCAGGGATCTTGAGAAGGTATCCCAGCAAATTGCAAAGCCTTTGTATGATGAGAAGGTGCAACCAACCACTTTGATACCAAAGCAAATTGGCAACACTTACACAGCATCCTTATACACGGCGTTTGCTTCGCTTCTTCACAACAAGCATAGCACACTGGCGGGCAGCAGGGTGATTATGTTCTCTTATGGAAGTGGTTTGACGGCTACAATGTTCTCACTCCGGTTAAATGAGGGTCAAAACCCATTTAGCTTGTCAAACATTGCAGCAGTTATGGATGTTGCAGACAAATTGAAGTCAAGGCATGAGTTCCCACCTGAGAAATTCGTCGAAACCCTGAAGCTAATGGAGCACCGGTATGGTGCGAAAGACTTTGTGACCAGCAAAGATACCAGCCTTTTGGCTCCAGGAACCTACTACCTGACCGAGGTGGACTCTATGTACCGTAGATTCTATGCCAAGAAACCAACAAATGATGCTACCACGGCCTCTGAGAATGGTTTGTTCACCAATGGTTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_14168.p1 GENE.S_Transcript_14168~~S_Transcript_14168.p1 ORF type:5prime_partial len:561 (+),score=99.58,HMG_CoA_synt_C|PF08540.6|1.1e-116,HMG_CoA_synt_N|PF01154.13|6e-82 S_Transcript_14168:1-1683(+)
RSLVFSHIINGEEGGSLYIHRVPPTEFPQNQNPKFLYSLLFSSLLSSTHPLIALLDLPYSLSLSPSNFYYQLSLSPRYPLQENIFDLFVINLTMAKNVGILALQIYFPPTSVQQEALEVHDGVSKGKYTIGLGQDCMAFCTEVEDIISMSLTAVTSLLEKYQIDPKQIGRLEVGSETVLDKSKSIKTFLMQIFEEHGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLVGPDAPIAFESKLRGSHMAHAYDFYKPNLASEYPVVDGKLSQTCYLMAVDSCYKHFCSKYEKFEGKQFSINDADYVVFHSPYNKLVQKSFARLMYNDFLRNASSINEEAKEKLSPFSNLSSDESYQSRDLEKVSQQIAKPLYDEKVQPTTLIPKQIGNTYTASLYTAFASLLHNKHSTLAGSRVIMFSYGSGLTATMFSLRLNEGQNPFSLSNIAAVMDVADKLKSRHEFPPEKFVETLKLMEHRYGAKDFVTSKDTSLLAPGTYYLTEVDSMYRRFYAKKPTNDATTASENGLFTNGY*

Click here to download the sequence:
Link to NCBI Protein BLAST