Transcript Information: S_Transcript_141720.p1


Annotated TAIR IDAT5G59180.1
Annotated Gene NameDNA-directed RNA polymerase II
Annotated Gene Symbol(s)NRPB7
Annotation TypeOrtholog
Chromosome Positionchr5:23883499-23884976 | Forward length=176
E-Value6.8E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6290456229792
Replicate 22.6074205840699
Replicate 35.3651595879565
Condition 2: 8 Hour
Replicate 18.5301561268532
Replicate 212.20282653076
Replicate 38.9138999075376
Condition 3: 24 Hour
Replicate 12.9788477487174
Replicate 25.1508662673517
Replicate 31.3757478766427


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_141720.p1 GENE.S_Transcript_141720~~S_Transcript_141720.p1 ORF type:5prime_partial len:110 (-),score=29.76,S1|PF00575.19|1.4e+04,S1|PF00575.19|4.2e-10,SHS2_Rpb7-N|PF03876.13|3.7e-09 S_Transcript_141720:378-707(-)
GAGGGTACTTGCAGTGGGCGTCATGGATTTGTGGTTGCAATTATGGGAATAGAGAATGTGGGCAAAGGGTTGATCAGGGATGGAACTGGGTTTGTCACTTTCCCTGTCAAATACAAGTGTGTTGTCTTTAGGCCTTTCAAGGGTGAGATTCTTGAAGCTGTAGTTACTATGGTCAACAAGATGGGTTTCTTTGCTGAGGCTGGCCCTGTGCAAATTTTCGTGTCTAGTCATCTGATACCGGATGACATGGAATTCCAATCTGCTGATACACCAAATTATACAACTTCTGATGGATCAGTTAAGATTCAGAAGGACAGCAAGCGTGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_141720.p1 GENE.S_Transcript_141720~~S_Transcript_141720.p1 ORF type:5prime_partial len:110 (-),score=29.76,S1|PF00575.19|1.4e+04,S1|PF00575.19|4.2e-10,SHS2_Rpb7-N|PF03876.13|3.7e-09 S_Transcript_141720:378-707(-)
EGTCSGRHGFVVAIMGIENVGKGLIRDGTGFVTFPVKYKCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSSHLIPDDMEFQSADTPNYTTSDGSVKIQKDSKRG*

Click here to download the sequence:
Link to NCBI Protein BLAST