Transcript Information: S_Transcript_142026.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value1E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12672857731038
Replicate 20.42024361061933
Replicate 30.26346765833715
Condition 2: 8 Hour
Replicate 10.3046484331019
Replicate 20.21306522514025
Replicate 30.30451210864259
Condition 3: 24 Hour
Replicate 10.31206976415135
Replicate 20
Replicate 30.48041989343078


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_142026.p1 GENE.S_Transcript_142026~~S_Transcript_142026.p1 ORF type:5prime_partial len:210 (-),score=35.58,PPR_2|PF13041.2|7.3e-20,PPR_2|PF13041.2|3e-10,PPR_2|PF13041.2|1.2e-16,PPR_2|PF13041.2|5.6e-17,PPR_2|PF13041.2|1.4e-07,PPR_1|PF12854.3|3.6e-12,PPR_1|PF12854.3|1.9e-12,PPR_1|PF12854.3|8.1e-09,PPR_1|PF12854.3|1.5e-10,PPR_1|PF12854.3|2.1e-06,PPR|PF01535.16|3e-10,PPR|PF01535.16|3.2e-07,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|7.1e-08,PPR|PF01535.16|0.0036,PPR_3|PF13812.2|1e-07,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|6.7e-05,PPR_3|PF13812.2|0.46 S_Transcript_142026:133-762(-)
CCCTCACCTGATATTTATACGTACAACACTCTCATCGATGGCTTGTCCAAGAACGATAGACTTGAATCTGCTTTCCAACTTTTCGAGGAAATGAAATCTCATGGACCACATCCAAATGTTGTCACATATGCTTCGTTGCTTGATGGTCTTTGTAAAAATACACAAGTTGACGAGGCCATATCAATGCTAAAGCAAATGGACAAGAATGGAGTGGTCCCCATCATTACCATCTTCAATATCTTAATTGATGGTTTATGTCAAGCAGGAAGACTTGGAGAAGCACTCACATTCTTCTCTTCTCTCGAGTCCAAGGGGTTACAACCTAATCAGTGTACGTACAATGTAATGATCAAAGGACTTTGCAAGCAAGGGAAATCAAGTGATGCACATAAACTATTAACAGTGATGGAGGAAAATGGATGTCCTCCAGATGCTTGCACCTACAACACAATCATCAGAGGATTTCTTCACGATAATGATATAAGCACAGCTTTGGAATTTATCCACATTATGACTGCCAAAAACTTTGCAGCTGATGCTGGAACTACTTCAATAATTTTTGAATTATTGACTACTTGTCACATTAGCAGTGCAGACAAGGCATTGCTTCAGAAGTTTTTTCAGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_142026.p1 GENE.S_Transcript_142026~~S_Transcript_142026.p1 ORF type:5prime_partial len:210 (-),score=35.58,PPR_2|PF13041.2|7.3e-20,PPR_2|PF13041.2|3e-10,PPR_2|PF13041.2|1.2e-16,PPR_2|PF13041.2|5.6e-17,PPR_2|PF13041.2|1.4e-07,PPR_1|PF12854.3|3.6e-12,PPR_1|PF12854.3|1.9e-12,PPR_1|PF12854.3|8.1e-09,PPR_1|PF12854.3|1.5e-10,PPR_1|PF12854.3|2.1e-06,PPR|PF01535.16|3e-10,PPR|PF01535.16|3.2e-07,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|7.1e-08,PPR|PF01535.16|0.0036,PPR_3|PF13812.2|1e-07,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|6.7e-05,PPR_3|PF13812.2|0.46 S_Transcript_142026:133-762(-)
PSPDIYTYNTLIDGLSKNDRLESAFQLFEEMKSHGPHPNVVTYASLLDGLCKNTQVDEAISMLKQMDKNGVVPIITIFNILIDGLCQAGRLGEALTFFSSLESKGLQPNQCTYNVMIKGLCKQGKSSDAHKLLTVMEENGCPPDACTYNTIIRGFLHDNDISTALEFIHIMTAKNFAADAGTTSIIFELLTTCHISSADKALLQKFFQN*

Click here to download the sequence:
Link to NCBI Protein BLAST