Transcript Information: S_Transcript_142028.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value9E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12672857731038
Replicate 20.10506090265483
Replicate 30.8782255277905
Condition 2: 8 Hour
Replicate 10
Replicate 20.21306522514025
Replicate 30.50752018107098
Condition 3: 24 Hour
Replicate 10.10402325471712
Replicate 20.32376873680496
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_142028.p1 GENE.S_Transcript_142028~~S_Transcript_142028.p1 ORF type:5prime_partial len:210 (-),score=35.39,PPR_2|PF13041.2|7.3e-20,PPR_2|PF13041.2|1.5e-16,PPR_2|PF13041.2|1.5e-18,PPR_2|PF13041.2|1.5e-16,PPR_2|PF13041.2|1.4e-07,PPR_1|PF12854.3|3.6e-12,PPR_1|PF12854.3|7.2e-12,PPR_1|PF12854.3|2e-10,PPR_1|PF12854.3|7.4e-10,PPR_1|PF12854.3|2.1e-06,PPR|PF01535.16|3e-10,PPR|PF01535.16|9.1e-07,PPR|PF01535.16|1.8e-05,PPR|PF01535.16|7.2e-08,PPR|PF01535.16|0.0036,PPR_3|PF13812.2|1e-07,PPR_3|PF13812.2|4.1e-05,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|0.46 S_Transcript_142028:133-762(-)
CCCTCACCTGATATTTATACGTACAACACTCTCATCGATGGCTTGTCCAAGAACGATAGACTTGAATCTGCTTTCCAACTTTTCGAGGAAATGAAATCTCATGGACCACATCCAAATGTTGTCACATATGCTTCGTTGCTTGATGGTCTTTGTAAAAATACACAAGTTGACGAGGCCATGTCAATGCTGATTCAAATGGAGAATAATGGAGTTGCCCCCACTGTTGTCATCTTTAATATCCTAATTGACGGTCTATGTGAAGTTGGGAGACTTGGAGAAGCAGTCACATTCTTCTCTTCTCTCCAGTCTAGGGGGTTACAACCAAATCAGCGTACATATAACGTAATGATCAAAGGACTTTGCAAGCAAGGGAAATCAAGTGATGCACATAAACTATTAACAGTGATGGAGGAAAATGGATGTCCTCCAGATGCTTGCACCTACAACACAATCATCAGAGGATTTCTTCACGATAATGATATAAGCACAGCTTTGGAATTTATCCACATTATGACTGCCAAAAACTTTGCAGCTGATGCTGGAACTACTTCAATAATTTTTGAATTATTGACTACTTGTCACATTAGCAGTGCAGACAAGGCATTGCTTCAGAAGTTTTTTCAGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_142028.p1 GENE.S_Transcript_142028~~S_Transcript_142028.p1 ORF type:5prime_partial len:210 (-),score=35.39,PPR_2|PF13041.2|7.3e-20,PPR_2|PF13041.2|1.5e-16,PPR_2|PF13041.2|1.5e-18,PPR_2|PF13041.2|1.5e-16,PPR_2|PF13041.2|1.4e-07,PPR_1|PF12854.3|3.6e-12,PPR_1|PF12854.3|7.2e-12,PPR_1|PF12854.3|2e-10,PPR_1|PF12854.3|7.4e-10,PPR_1|PF12854.3|2.1e-06,PPR|PF01535.16|3e-10,PPR|PF01535.16|9.1e-07,PPR|PF01535.16|1.8e-05,PPR|PF01535.16|7.2e-08,PPR|PF01535.16|0.0036,PPR_3|PF13812.2|1e-07,PPR_3|PF13812.2|4.1e-05,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|0.46 S_Transcript_142028:133-762(-)
PSPDIYTYNTLIDGLSKNDRLESAFQLFEEMKSHGPHPNVVTYASLLDGLCKNTQVDEAMSMLIQMENNGVAPTVVIFNILIDGLCEVGRLGEAVTFFSSLQSRGLQPNQRTYNVMIKGLCKQGKSSDAHKLLTVMEENGCPPDACTYNTIIRGFLHDNDISTALEFIHIMTAKNFAADAGTTSIIFELLTTCHISSADKALLQKFFQN*

Click here to download the sequence:
Link to NCBI Protein BLAST