Transcript Information: S_Transcript_142031.p1


Annotated TAIR IDAT5G64320.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25723247-25725439 | Reverse length=730
E-Value3E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32454879555098
Replicate 20.53811681847597
Replicate 30.674734246961
Condition 2: 8 Hour
Replicate 10.26006573557479
Replicate 21.0913096897428
Replicate 30.77984808310907
Condition 3: 24 Hour
Replicate 11.0656040727119
Replicate 20.27638794605302
Replicate 30.92275772213839


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_142031.p1 GENE.S_Transcript_142031~~S_Transcript_142031.p1 ORF type:5prime_partial len:82 (+),score=17.38,PPR_2|PF13041.2|2.6e-10,PPR_2|PF13041.2|1.4e-19,PPR_1|PF12854.3|0.00013,PPR_1|PF12854.3|4.2e-11,PPR_1|PF12854.3|3.9e-07,PPR|PF01535.16|0.00031,PPR|PF01535.16|3.5e-08,PPR|PF01535.16|0.0079,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|0.00095,PPR_3|PF13812.2|2.8 S_Transcript_142031:2-247(+)
TTGCTTTATGGTCTTTGTAAAAATGCACAAGTTGATGAGGCCATATCAATGCTCAAGCAAATGGACAACAATGGAGTGGTCCCTACTATTACCATCTTCAATATCTTAATTGATGGCTTATGTCAAGCAGGAAGACTTGAAGAAGCAGCAAATTTCTTCTCATCCCTCAAAGAAAGGGGTTTAAAACCAAATCAGTACACGTTCAATATAATGATGAGAGGGCTTTGCAAACAAGGGAGATGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_142031.p1 GENE.S_Transcript_142031~~S_Transcript_142031.p1 ORF type:5prime_partial len:82 (+),score=17.38,PPR_2|PF13041.2|2.6e-10,PPR_2|PF13041.2|1.4e-19,PPR_1|PF12854.3|0.00013,PPR_1|PF12854.3|4.2e-11,PPR_1|PF12854.3|3.9e-07,PPR|PF01535.16|0.00031,PPR|PF01535.16|3.5e-08,PPR|PF01535.16|0.0079,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|0.00095,PPR_3|PF13812.2|2.8 S_Transcript_142031:2-247(+)
LLYGLCKNAQVDEAISMLKQMDNNGVVPTITIFNILIDGLCQAGRLEEAANFFSSLKERGLKPNQYTFNIMMRGLCKQGRC*

Click here to download the sequence:
Link to NCBI Protein BLAST