Transcript Information: S_Transcript_142107.p1


Annotated TAIR IDAT4G24175.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0307 (InterPro:IPR006839); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12547018-12548810 | Forward length=306
E-Value3.8E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2834222303145
Replicate 24.369578451326
Replicate 34.730442047417
Condition 2: 8 Hour
Replicate 13.1849608915199
Replicate 23.4865218659314
Replicate 32.9067064915884
Condition 3: 24 Hour
Replicate 13.9717969982898
Replicate 23.090519760411
Replicate 33.3574799370447


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_142107.p1 GENE.S_Transcript_142107~~S_Transcript_142107.p1 ORF type:complete len:308 (+),score=45.75,DUF615|PF04751.10|1.5e-35 S_Transcript_142107:154-1077(+)
ATGTCCCAAGCAGTAATAAGAGCAGCATCAATAAGTATAACCCCATTATTATTTCACCGCCATTTCAATCACTTCCTTTCTCCTCACCGTCTCACATTTCTCCCCTTCCCCCCTTCTCACACCCGCCATGCCCATTTCAAATCTCAGGGGCTCCACCTGCCCCGAGAACCCGACCCGGTTAAACCCACCCGGACCTCCGACGATGAATCCGAATCCGATAAGAAAAGAAGAAGCCGTAACGAAATGAAACGCCAAGCTAGACAATCCGTTCGTTGGGGAATGGACCTTGCTTCTTTCTCCATTCCCCAAATCAAGCTTATTCTCAAGGTTGCTACTTTGGAAAAAGAGGTTTTCGATGCTCTAATGCTTGTTAAGAGACTTGGACCTGATGTTCGTGAAGGCAAGCGAAGGCAATTCAATTATATAGGGAAACTGCTGCGTGATGCACAGCCAGAGTTGCTTGGAGAATTAATTCAGGCTACTAAAGATGGTGATCAGAGTAGGTTTCAGGCCTTAGCTGGCTCTGTTAAATCAATCGATGAAGCTGCTGAAGAAGAGTTTCATGAATCCGAACCGGAGCAGGAAGTTGAGGATTCTAGTGAGCATTTAGTCCTGGTAAGCAAATGGTATGATGGTCTCATCAACAAGGATGTCCAAATAAGCAACGAAGTTTATTCAATTGATGATGTAGAATTTGATCGCCAGGAGTTGCGGAAACTTGTTCGGAAAGTGCACTATGTTCAAGATCGCCAGATTAGCAGTGAAGAAAACATAACTGCTGAATTGACATCTGCTAAAAAGTCACTTACCCAATTTCTCTGTACTTTGGCAAAACGTGTGGCAGAGTCAAGTGCCCAAAATGCAACAATATTAACGCTCATGTTATTGTACAATTCGTTTTTCTCTGTCACATCTTCTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_142107.p1 GENE.S_Transcript_142107~~S_Transcript_142107.p1 ORF type:complete len:308 (+),score=45.75,DUF615|PF04751.10|1.5e-35 S_Transcript_142107:154-1077(+)
MSQAVIRAASISITPLLFHRHFNHFLSPHRLTFLPFPPSHTRHAHFKSQGLHLPREPDPVKPTRTSDDESESDKKRRSRNEMKRQARQSVRWGMDLASFSIPQIKLILKVATLEKEVFDALMLVKRLGPDVREGKRRQFNYIGKLLRDAQPELLGELIQATKDGDQSRFQALAGSVKSIDEAAEEEFHESEPEQEVEDSSEHLVLVSKWYDGLINKDVQISNEVYSIDDVEFDRQELRKLVRKVHYVQDRQISSEENITAELTSAKKSLTQFLCTLAKRVAESSAQNATILTLMLLYNSFFSVTSSG*

Click here to download the sequence:
Link to NCBI Protein BLAST