Transcript Information: S_Transcript_142238.p1


Annotated TAIR IDAT2G20880.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:8986053-8987063 | Forward length=336
E-Value1.3E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4134339355433
Replicate 21.297811150442
Replicate 31.2656779665216
Condition 2: 8 Hour
Replicate 11.7248477462387
Replicate 22.028819607034
Replicate 31.9852995318365
Condition 3: 24 Hour
Replicate 11.9274897197583
Replicate 21.8331024069105
Replicate 31.5454684071762


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_142238.p1 GENE.S_Transcript_142238~~S_Transcript_142238.p1 ORF type:complete len:408 (+),score=61.54,AP2|PF00847.16|1.1e-11 S_Transcript_142238:410-1633(+)
ATGTCGGGTTCTGACCCGAGTAATTCAAGTGGGAAAGCCAAGAAGATTATGGAAGATGCTGAAACCATGGCTAAGCTGAAATGGGATCGAGACAAAGGCAAGGATTCGGTTCAAACATTCAGGACTCAGCCTCAACCATCACCATTGAAGAATGTTTTCGATGAAGCTCCCGTGTCGGGTCGGCCCTTGAAGAAGATTCGGAGCCCCGAACGTCAAGATCCTCACCAGTATCTTCAGTCATGTGGTTCTTTCCCACCTCAACAATCATCATCGCCTGCTCTGTTTCCTTATCAATCTTCCAAGTTTGCTTTCCCATTTGCTTATGATGGATCATCTCCTTCCTTTGCCACCACCCAAAATACACAATTTCCTGTTTTTAACCCCCAACAACAACAGATGATTTCATTTAATCAAGGATATGCCTATCCGTATCGATATCAGAAACCAACAGCAGCTGTCTCTAATCAGCTACAATATTGGGGTGATGCATTGAATCTGAGCCCAAGAGGGAGGATGATTATGATGAACAGACTCGCCGCCGCTCAGCAAGGTAGCGCCACTGAAGGGGGGGCTTTCCGGCCACCAGGTGGCGGTGGATCGCTGATGGTGCCGCCGGTGTCGACCACGAAGCTCTACAGGGGAGTGAGGCAGCGACACTGGGGCAAATGGGTGGCGGAAATCCGCCTCCCCAAGAATCGGACACGGCTTTGGCTCGGCACTTTCGACACCGCAGAGGATGCCGCCTTGGCGTACGACCGGGAGGCGTTCAAGCTCCGAGGCGAGAATGCCCGGCTCAACTTCCCCGAGCTGTTCCTAAACAAGGACCGACCCGGCCCAGCCCAGGAACCCACGCCCCACCCGCCACCGGATCTCGAACCAGAGCCAGAGGAGGAGGAGTCAGATCCTGCCTCGAGCGAGGTGACGGTGATGAGCGAGGCGCAGGCGGTCGGGGAACAGAGCTCGGGAGGAGGTTCGGAGAGCTCGGAATTGGCATGGAAAGAGATTTGGTTTAATGCGATACCAGCAGGATGGGGACCAGGGAGTCCTGTTTGGGATGATTTGGATACTAGTTTGCTTCAATCTAATCTCTCGTTTTCTACAAATTTCTATCAACAAAACCAGTCCCAGGAACAGCAGGAGTTGAGTGATCATCATGATACTTGTTCCTCTCTTTCTTCTTCTTCTTGTCCCATGAGGCCTTTCTTTACCAAAGATCAGGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_142238.p1 GENE.S_Transcript_142238~~S_Transcript_142238.p1 ORF type:complete len:408 (+),score=61.54,AP2|PF00847.16|1.1e-11 S_Transcript_142238:410-1633(+)
MSGSDPSNSSGKAKKIMEDAETMAKLKWDRDKGKDSVQTFRTQPQPSPLKNVFDEAPVSGRPLKKIRSPERQDPHQYLQSCGSFPPQQSSSPALFPYQSSKFAFPFAYDGSSPSFATTQNTQFPVFNPQQQQMISFNQGYAYPYRYQKPTAAVSNQLQYWGDALNLSPRGRMIMMNRLAAAQQGSATEGGAFRPPGGGGSLMVPPVSTTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFLNKDRPGPAQEPTPHPPPDLEPEPEEEESDPASSEVTVMSEAQAVGEQSSGGGSESSELAWKEIWFNAIPAGWGPGSPVWDDLDTSLLQSNLSFSTNFYQQNQSQEQQELSDHHDTCSSLSSSSCPMRPFFTKDQE*

Click here to download the sequence:
Link to NCBI Protein BLAST