Transcript Information: S_Transcript_142254.p1


Annotated TAIR IDAT5G20635.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: keratin filament, chloroplast; CONTAINS InterPro DOMAIN/s: Keratin, high sulphur B2 protein (InterPro:IPR002494); Has 6153 Blast hits to 2882 proteins in 265 species: Archae - 6; Bacteria - 47; Metazoa - 4777; Fungi - 68; Plants - 187; Viruses - 30; Other Eukaryotes - 1038 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6979314-6981767 | Reverse length=251
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.86709026580788
Replicate 20.55295211923596
Replicate 30.6933359429925
Condition 2: 8 Hour
Replicate 10.96204768347968
Replicate 20.44855836871632
Replicate 30.53423176954841
Condition 3: 24 Hour
Replicate 10.82123622145091
Replicate 20.5112137949552
Replicate 30.75855772646966


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_142254.p1 GENE.S_Transcript_142254~~S_Transcript_142254.p1 ORF type:5prime_partial len:399 (+),score=136.07 S_Transcript_142254:3-1199(+)
GCTGCTGCCCCCCCTGGTTTTGCTCCTACTCCTGCTGCTGCCCCCCCTGGTTTTGCTCCTAGTCCTGCTGCTGCCCCCCCTGGTTTTGCTCCTACTCCTGCTGCTGCCCCCCCTGGTTTTGCTCCTACTCCTGCTGCTGCACCCCCTGGTTTTGCTCCTACACCTGCTGCTGCCCCTGGTCCCTTCCCATCTCTTTCCCCAATTGCTTCCCCTGCTCCCGCCCCAACTGCTTCCCCCGCTCTTGCCCCAACTCCTGCCCCAGCTGCTTCGCCTGATCTTGCCCCAACTGCCCCAGCTGCTTCGCCTGCTCTTGCCCCAACTCCTGCCCCGGCTGCTTCGCTTGCTCTTGCCCAAACTCCTGCCCCGGCTGCTTCTCCTGCTGTTGCCCAAACTCCTGCCCCGGCTGCTTCGCCTGCTCTTGCCCCAACTCCTGCCCCGGCTGCTTCGCCCGCTTTTGCCCCAGCTGCTTCTCTGGCTCCAACTCCTGCTCCTGCTGCTTATCCCGCTCTCACCCAAACTCCCGCCCCAGTTCCAGATCCCACTCTCGCTCCAGCACCAGCTCCAGCTCTAGCCCCAGTTCCAGCTCTGGCCTCAGCTCCCGCTCCACCTGGCCCACCTACAGCTGCAGCTCCAGCTCCTGCTGCTGCTCGAGCCCCAGCTCCCATGCCAGCCCCTGCTTCTGCTCCAGCTCTGACGTCCACTTCATTTCCAACTCCAGTCTCCGTTCCAGCTCCTGATCCCATTTGTACCTCAGCTCCTTCTCCAGCTCTTGTTCCGGTTTCTATTCCTGTCTCAAGTCCAGCTCCAGCTCCATTCGCAGTTACAGCTACTGTTCCTATTGAGATTCCAGCTACACTTCCTGTTTCAACCCCTGACTCAGTTCTAGCTTCAGATCAAGAACCAAAGGTTGAAAGCAACGATCAAGGAGTAATAGCAGGTGGAGCTGCTGATATCATAAGCCCTGGGTCTGGAAGTTCGGCTCAGGAACCCAAGACAGCTGCAAGCATTAATCTGGAAACTGCCACAGTGACAGGAAGCAACCCTATGTTAGCTCCTGGACCTGAAAAGGCTGATGCTAGTAATCCAGGGAATCCTGATTTGGCAGGCGGAGCTGCCACCATTGTCAGTCCTGCAAACGTGTTAACAGTGATAGAAAGTAGTGCTGTGACTCCATCGGCTGAGAACATCAACAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_142254.p1 GENE.S_Transcript_142254~~S_Transcript_142254.p1 ORF type:5prime_partial len:399 (+),score=136.07 S_Transcript_142254:3-1199(+)
AAAPPGFAPTPAAAPPGFAPSPAAAPPGFAPTPAAAPPGFAPTPAAAPPGFAPTPAAAPGPFPSLSPIASPAPAPTASPALAPTPAPAASPDLAPTAPAASPALAPTPAPAASLALAQTPAPAASPAVAQTPAPAASPALAPTPAPAASPAFAPAASLAPTPAPAAYPALTQTPAPVPDPTLAPAPAPALAPVPALASAPAPPGPPTAAAPAPAAARAPAPMPAPASAPALTSTSFPTPVSVPAPDPICTSAPSPALVPVSIPVSSPAPAPFAVTATVPIEIPATLPVSTPDSVLASDQEPKVESNDQGVIAGGAADIISPGSGSSAQEPKTAASINLETATVTGSNPMLAPGPEKADASNPGNPDLAGGAATIVSPANVLTVIESSAVTPSAENINK*

Click here to download the sequence:
Link to NCBI Protein BLAST