Transcript Information: S_Transcript_142373.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.75177969590905
Replicate 20.37394558572059
Replicate 30.31258874717967
Condition 2: 8 Hour
Replicate 11.5662716052132
Replicate 21.1375516257488
Replicate 32.1677133157608
Condition 3: 24 Hour
Replicate 11.2341742085081
Replicate 20.89630893239792
Replicate 30.28499485203521


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_142373.p1 GENE.S_Transcript_142373~~S_Transcript_142373.p1 ORF type:5prime_partial len:177 (+),score=15.50,zf-RVT|PF13966.2|5.5e-18,zf-RVT|PF13966.2|8.4e+03 S_Transcript_142373:3-533(+)
GGTCCTTCCTTTCCTATCGCTAGATTTATTTGGAAGGCTAAGTCCCCCCTTAAGGTGAGGGCTTTTGTTTGGACCCTGGCTCTAGGGAGGATCAATACCAATGATATGCGACAACGACGGAGACCTTCTTCGTGCCTCTCCCCTGATATTTGTGTCATGTGCGGATCAAGTGGGGAGACCGCCTCTCATTTGTTTCTCCATTGTTCTGTCGTGAGATCTCTGTGGGCTTCGCTTTTTGGTGTGCGTGGGGAAGCCGCGGTGTGCCCATCTAATGTGACAGAGTTCCTCCAAATCCATTTTTGGGGGCTTGGTCGGGATAAAGAGCTGGTTACTTTATGGCGTAATGCAATCCTTGCTATCCTATGGTGTGTTTGGCTGGAGAGGAATGCTAGGGTATTTAATCAAGCTTCTCTCCCTCCTCCCCTATTATGGGAGCGTGTTACATTCTTGGCTTCCCTTTGGAGCAAGGCGGGGGGTGCTTTCCGTAGCTATTCTATTTCAGATGTACAACGCAATTGGGCTTCCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_142373.p1 GENE.S_Transcript_142373~~S_Transcript_142373.p1 ORF type:5prime_partial len:177 (+),score=15.50,zf-RVT|PF13966.2|5.5e-18,zf-RVT|PF13966.2|8.4e+03 S_Transcript_142373:3-533(+)
GPSFPIARFIWKAKSPLKVRAFVWTLALGRINTNDMRQRRRPSSCLSPDICVMCGSSGETASHLFLHCSVVRSLWASLFGVRGEAAVCPSNVTEFLQIHFWGLGRDKELVTLWRNAILAILWCVWLERNARVFNQASLPPPLLWERVTFLASLWSKAGGAFRSYSISDVQRNWASL*

Click here to download the sequence:
Link to NCBI Protein BLAST