Transcript Information: S_Transcript_142489.p1


Annotated TAIR IDAT1G61520.1
Annotated Gene Namephotosystem I light harvesting complex gene 3
Annotated Gene Symbol(s)LHCA3
Annotation TypeHomolog
Chromosome Positionchr1:22700152-22701149 | Forward length=273
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.376550146337
Replicate 210.105094453824
Replicate 313.796856001472
Condition 2: 8 Hour
Replicate 14.8836771718625
Replicate 26.489543880226
Replicate 33.7424770604166
Condition 3: 24 Hour
Replicate 111.83959334223
Replicate 28.6503097619646
Replicate 39.0491304354233


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_142489.p1 GENE.S_Transcript_142489~~S_Transcript_142489.p1 ORF type:5prime_partial len:131 (+),score=28.76 S_Transcript_142489:2-394(+)
GCTTGGATGCAAAGCACAAGGGTCTGTCTGCTCCTTGCTGTTAAGAAAATTTCCAAAAGACCAAACAAATCAGGCAAATGGATAATAACTAGGGCAAAGGAGTGCTTAAAACACCGACTGAAAGATGAGAGAATAAGTATTTTTACCTTAACAGGGGGAGTAGAAGATGCTCTGACAACAAAAGAGTTCTTCCTTGAGGTAGAAGGTGAAGAAACCCCAGGCCTGCTACCAAGCATCTGCCTTGCAGTCTCCACTGAAGAAGTCAAAGAAGATGAAACCAAAGCTTGTGCTGCCATTTTTAGTTCTCAAAAGCTAAGAGATTATTCTTCTGATGAATGGAAAATAATGAAGGGAAGGGAAGGGAGAAAACTGAATAGAGAAGCCCCAAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_142489.p1 GENE.S_Transcript_142489~~S_Transcript_142489.p1 ORF type:5prime_partial len:131 (+),score=28.76 S_Transcript_142489:2-394(+)
AWMQSTRVCLLLAVKKISKRPNKSGKWIITRAKECLKHRLKDERISIFTLTGGVEDALTTKEFFLEVEGEETPGLLPSICLAVSTEEVKEDETKACAAIFSSQKLRDYSSDEWKIMKGREGRKLNREAPN*

Click here to download the sequence:
Link to NCBI Protein BLAST