Transcript Information: S_Transcript_142556.p1


Annotated TAIR IDAT1G02730.1
Annotated Gene Namecellulose synthase-like D5
Annotated Gene Symbol(s)ATCSLD5, CSLD5, SOS6
Annotation TypeOrtholog
Chromosome Positionchr1:594697-598473 | Reverse length=1181
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0553144739323
Replicate 22.4951964380523
Replicate 32.0199187139182
Condition 2: 8 Hour
Replicate 12.3102506176894
Replicate 21.5713560354094
Replicate 33.1973771407472
Condition 3: 24 Hour
Replicate 10.44209883254774
Replicate 21.8886509646956
Replicate 32.6122831705299


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_142556.p1 GENE.S_Transcript_142556~~S_Transcript_142556.p1 ORF type:5prime_partial len:840 (+),score=146.43,Cellulose_synt|PF03552.10|0,Glyco_trans_2_3|PF13632.2|1.2e+02,Glyco_trans_2_3|PF13632.2|2e-07,Glyco_trans_2_3|PF13632.2|8.4e+02,Glyco_tranf_2_3|PF13641.2|12,Glyco_tranf_2_3|PF13641.2|1.7e+03,Glyco_tranf_2_3|PF13641.2|0.00031 S_Transcript_142556:2-2521(+)
GAAGCCATGTGGTTATGGGGGATGTCTGTAACCTGTGAGATTTGGTTTGCCTTCTCTTGGATTTTAGACCAGCTTCCGAAAATCTGCCCTGTGAACAGAATAACAGACCTTACTGTTCTGAAAGAGCTCTATGAATCTCCTACTCTCCGCAACCCAAAGGGCAGATCTGACCTTCCTGGAATTGATGTATTTGTTTCCACAGCCGACCCAGAGAAGGAGCCTCCCCTCGTCACTGCCAACACCATTCTTTCGATACTGGCAGTAGACTATCCAGTCGAGAAGTTGGCATGTTATCTATCAGATGATGGAGGTGCCCTTCTGACATTTGAAGCAGTGGCTGAGACAGCAAGCTTTGCGCGAATTTGGGTTCCTTTCTGTAGAAAGCATGGGATAGAGCCAAGGTGTCCAGAGGCTTATTTTGGGCAGAAGAGGGATTTTCTTAAGAACAAAGTGAGGTTGGACTTTGTTCGGGAGAGGAGACGAGTGAAGAGGGAGTATGATGAGTTTAAGGTGCGTATCAACTCCTTGCCGGAGTCTATTAGAAGAAGGTCTGATGCTTATAATGCCCATGAAGAGCTTCGCGCCAAGAAGAAACAAATGGAATTGGGAGAAAATGTTGCTGAACCCTTGAAGGTTCCTAAGGCTACTTGGATGTCTGATGGTTCTCACTGGCCTGGTACTTGGACTTCAGCTGAACCTGATCACTCTAGGGGTGATCATGCTGGCATCATTCAGGCTATGCTAGCCCCTCCAAACACAGAACCATTATATGGCTCGGAACCAGACGCAGAGAACCTGATTGATACAACAGAAGTGGATATACGCTTGCCCATGTTGGCTTATGTATCTAGAGAGAAGAGGCCAGGCTACGATCACAACAAGAAAGCAGGAGCAATGAATGCTTTAGTGAGAACCAGTGCAATCATGTCTAATGGACCATTTATCCTCAACCTCGACTGTGATCACTACATCTACAACTCCCTGGCTTTAAGGGAAGGAATGTGCTTCATGCTTGACAGAGGTGGTGACAGAATTTGCTATGTTCAATTCCCACAAAGATTTGAGGGAATCGATCCAAGTGACAGATATGCAAACCACAACACTGTGTTCTTTGATGTGAGCATGAGAGCCCTAGATGGTTTACAGGGTCCAATGTATGTTGGAACGGGGTGCCTATTCAGGAGGATCGCTCTCTATGGTTTCAGTCCTCCACGAGCCACAGAACATCATGGATGGTTTGGCTCGAGAAAACTCAAATTGCTACTAAGGAGGAGATCCAAGAAGACAAAGAAGGAAGAAGAGCCTGATGAAATTGCCTTGCCAGTACTACAAGATCAAGATGAGGATGACGACTTGGATATTGAATCCTTGATCCTTCCAAAGAGGTTCGGAAACTCCACTTCTCTAGCAGCATCTATTTCTGTGGCCGAATACCAAGGCAGGCTAGTCCAAGACCTGCAAGGCAAGGGCAATCAAGGGAGACCAGCCGGGTCACTTGCTGTTCCTCGAGAGCCTCTAGATGCTGCCACTGTGGCTGAGGCAATCAGTGTCATATCCTGCTTCTACGAGGACAGAACTGAGTGGGGAAAACGGGTGGGCTGGATCTACGGGTCAGTGACAGAAGATGTTGTTACAGGTTACAGGATGCACAATCGAGGGTGGAGGTCTGTTTACTGTGTCACAAAAAGGGATGCATTTCGTGGAACTGCTCCAATCAACCTGACAGATCGTCTCCACCAAGTTCTCCGATGGGCAACAGGTTCAGTCGAGATATTCTTCTCCAAGAACAATGCTCTTTTCGCAAGCAGGAGGATGAAATTCCTACAAAGAGTGGCTTACTTCAATGTCGGTCTTTACCCTTTCACTTCCATGTTCCTCCTGGTCTACTGCATGCTTCCTGCAATCTCACTGTTTTCAGGACAATTCATAGTACAGTCCCTTAGTGTAACCTTCCTGATCTTGCTACTCCTCATCACTCTCACTCTCTGTATGTTGGCCCTCCTCGAGATCAAATGGTCAGGAATCACCCTGCACGATTGGTGGAGAAACGAGCAGTTCTGGCTGATCGGTGGGACCAGTGCTCATCCTGCTGCCGTTTTACAAGGGCTGCTCAAAGTCATAGCAGGTGTCGACATCTCCTTCACGTTAACCTCAAAGTCCGGGACCCCAGATGATGCAGAAGATGAGTTTGCTGACCTGTATGTCGTCAAGTGGAGCTTTCTCATGGTTCCCCCCATCACAATTATGATGGTAAACGTGATTGCAGTTGCTGTTGGGGTCGCCAGAACCTTGTACAGTCCATTCCCTCAGTGGAGTAAGCTTCTTGGAGGGGTTTTCTTTAGCTTCTGGGTTCTCTGCCACCTGTTCCCTTTCGCAAAGGGGTTGATGGGTCGGAGAGGACGGGTCCCAACAATCGTATACATCTGGTCAGGGCTTTTATCTCTTGTTATCTCTTTGCTTTGGGTTTACATTAACCCTCCCTCTGGAAGTCAGGTCTCCGGAACATTTCAGTTCCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_142556.p1 GENE.S_Transcript_142556~~S_Transcript_142556.p1 ORF type:5prime_partial len:840 (+),score=146.43,Cellulose_synt|PF03552.10|0,Glyco_trans_2_3|PF13632.2|1.2e+02,Glyco_trans_2_3|PF13632.2|2e-07,Glyco_trans_2_3|PF13632.2|8.4e+02,Glyco_tranf_2_3|PF13641.2|12,Glyco_tranf_2_3|PF13641.2|1.7e+03,Glyco_tranf_2_3|PF13641.2|0.00031 S_Transcript_142556:2-2521(+)
EAMWLWGMSVTCEIWFAFSWILDQLPKICPVNRITDLTVLKELYESPTLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKLACYLSDDGGALLTFEAVAETASFARIWVPFCRKHGIEPRCPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQMELGENVAEPLKVPKATWMSDGSHWPGTWTSAEPDHSRGDHAGIIQAMLAPPNTEPLYGSEPDAENLIDTTEVDIRLPMLAYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCLFRRIALYGFSPPRATEHHGWFGSRKLKLLLRRRSKKTKKEEEPDEIALPVLQDQDEDDDLDIESLILPKRFGNSTSLAASISVAEYQGRLVQDLQGKGNQGRPAGSLAVPREPLDAATVAEAISVISCFYEDRTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNALFASRRMKFLQRVAYFNVGLYPFTSMFLLVYCMLPAISLFSGQFIVQSLSVTFLILLLLITLTLCMLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSGTPDDAEDEFADLYVVKWSFLMVPPITIMMVNVIAVAVGVARTLYSPFPQWSKLLGGVFFSFWVLCHLFPFAKGLMGRRGRVPTIVYIWSGLLSLVISLLWVYINPPSGSQVSGTFQFP*

Click here to download the sequence:
Link to NCBI Protein BLAST