Transcript Information: S_Transcript_142881.p1


Annotated TAIR IDAT3G48430.1
Annotated Gene Namerelative of early flowering 6
Annotated Gene Symbol(s)REF6
Annotation TypeOrtholog
Chromosome Positionchr3:17935609-17940456 | Forward length=1360
E-Value3E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7661502676224
Replicate 21.593423690265
Replicate 32.5614911227223
Condition 2: 8 Hour
Replicate 12.4879622036655
Replicate 22.4857609599696
Replicate 32.4868488872478
Condition 3: 24 Hour
Replicate 12.0631278852228
Replicate 22.1404710933217
Replicate 33.0826943161809


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_142881.p1 GENE.S_Transcript_142881~~S_Transcript_142881.p1 ORF type:5prime_partial len:180 (-),score=20.53,zf-H2C2_2|PF13465.2|1.9e+03,zf-H2C2_2|PF13465.2|1.4e+03,zf-H2C2_2|PF13465.2|0.0028,zf-H2C2_2|PF13465.2|5.9e-06,zf-H2C2_2|PF13465.2|1.7e+03,zf-C2H2|PF00096.22|1.9e+02,zf-C2H2|PF00096.22|0.02,zf-C2H2|PF00096.22|1,zf-C2H2|PF00096.22|0.0067 S_Transcript_142881:161-700(-)
GGGACTGAAGCCCACAGTGACTTTGTGAGGAGTCCTTGTGAAGGACTGAGACCAAGGAAGAAACATGATCTAGCACTTGCATCAACAGGGACTGTACAACAAAAGCATCCAGCAAAAAGGAATAAGAGATCTTCAGGCTGTTCAAATTCTTCTTCCCACAAACTGATGGATGGTAATAAGGCTTCTTACAAGTGTAATATTGAAGGCTGTCCAATGCTTATTACGACAGGGGCAGCGCTGTCGTTACACAAACGGAACAGATGCCACCACGAAGAATGTGGAAAGAGGTTCAGGTCCCATAAATATTTGATGCTTCACCAGCGGGTTCATGAGGACGAGAGACCATTCACGTGCACATGGAAGGGATGTGGTATGACTTTCAAGTGGGCTTGGGCTAGGACTGAACACTTAAGACTGCATACAGGTGAACGTCCTTACCAGTGCAAGGTTGAAGGTTGTGGCCTTACTTTCAGGTTTGTATCTGACTTCAGCCGTCATAGAAGGAAAACTGGGCATTTTGTAATACCTCCACATATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_142881.p1 GENE.S_Transcript_142881~~S_Transcript_142881.p1 ORF type:5prime_partial len:180 (-),score=20.53,zf-H2C2_2|PF13465.2|1.9e+03,zf-H2C2_2|PF13465.2|1.4e+03,zf-H2C2_2|PF13465.2|0.0028,zf-H2C2_2|PF13465.2|5.9e-06,zf-H2C2_2|PF13465.2|1.7e+03,zf-C2H2|PF00096.22|1.9e+02,zf-C2H2|PF00096.22|0.02,zf-C2H2|PF00096.22|1,zf-C2H2|PF00096.22|0.0067 S_Transcript_142881:161-700(-)
GTEAHSDFVRSPCEGLRPRKKHDLALASTGTVQQKHPAKRNKRSSGCSNSSSHKLMDGNKASYKCNIEGCPMLITTGAALSLHKRNRCHHEECGKRFRSHKYLMLHQRVHEDERPFTCTWKGCGMTFKWAWARTEHLRLHTGERPYQCKVEGCGLTFRFVSDFSRHRRKTGHFVIPPHI*

Click here to download the sequence:
Link to NCBI Protein BLAST