Transcript Information: S_Transcript_142947.p1


Annotated TAIR IDAT3G26750.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme E2C-binding protein (InterPro:IPR019193); Has 26 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9840139-9841719 | Reverse length=526
E-Value8.5E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5451625732996
Replicate 22.8987606717903
Replicate 32.6923702311826
Condition 2: 8 Hour
Replicate 13.0742807209006
Replicate 23.2251387637562
Replicate 33.3840852949514
Condition 3: 24 Hour
Replicate 11.75396874742
Replicate 22.1092233401345
Replicate 32.9916658509718


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_142947.p1 GENE.S_Transcript_142947~~S_Transcript_142947.p1 ORF type:complete len:548 (+),score=91.96,HECT_2|PF09814.5|1.2e-16 S_Transcript_142947:111-1754(+)
ATGCCGCCAGAAAACCCTAGAAAATGGAACTACACATGGGAAGCTCAATCTCACCTCCCTATCATCAAACTCTTCCTCTTCAACTCCCAAATCAATCCAACCTCTCATTGCAACAAGCTTCAAGCCGATTTAAAGTTCGAAAAATCACTGATAAAACTAACTTGGAAAGAGCTAGTACCTCCAAATCAAGTCTCAGTCGTCGTTCCACTCCCTAGGGTTTTGGTAGACCTCGATTCTCCGGTGAATTGCAGAGCCTGGAACGATCATATGGAGGTCAAGATTGCTTTGTTACTCCCGGTTGATCATCCTATAGTTTCTAGCTTCATTTCTGAACTTAATTCTGGAGATGAAGCAGGTCCTTGTGGTTCCTCAGGCCGGTATCTGGAGCCGCTTTCGATGGACTCTGATTTCAAAAATTTGTCTTGTAAAGGAGATGTGGACATCTATTGCAGGAATTGTGCCTTTAAGTTGACTAAAGGTCCTATTAGGTGTTTGGTGGACCTGCCATCAGTTAACTGGACAGATGTAGCTGACAACTGGTTTGGTGGTTGCTGTTGTTCATTTGGTGGGATAAGTGAGAAACTGGTGGCTAAGTATGTCAAATCTTATAGATGTGCCGAGGGGACTTGCTTATTAACTACTGCCTCTGTCATTATCTTTAAGGATGATGTTTCTTGTTTTATGTCACCAAAGGTGGATCAGACTATAAAATGCTACGCCAGTGGCTCCACTGACAAGACATGTTCTTCTGAGGATGCTGATGCGAGGGTGTGTCATTCTACTGAAAGTGCCATAGTGCACTCAACGCAATCTCAAATAGATAATAATGTGGTCTCTGGAGGCTGTACACCACCTGATGATCACAGTAGACAGAAATCATCTGGTACTTCCCCTGGACATGATTATTCTGAACATGCATCTGAACATCAATGTTGTGCACATGGTGATGCTGAATCTGCTCTCGAGGACCAAGCTATTAGGGCACCGAATGGTCTGCTAGCTGATCAGAAGTCATTTCTTAATTGCTATCTTGGAACTGGTTTTTTGTTCAGATCATCTGGCCTTTCAAAAGATATTGAATGGATTGATTTCTCATGTCCTCAGTGCTCTGTTATCATGGGTGCATACCCTTGTGCTCATGACTCTGAACCATTAGATGGTGGCATCCGGCTGCTGAAATGTTACATCACAATTTCTCCTCCCTCTGACTCATCGGATGACTTGTTCAGCAAGTATACATTGGAGAGAATGTTCACCTGTCAGCTCTTGGAAAGTGCTAAAGATGAATTATCCTTCCGGACTGTTGTTAAGGATCTGAAGACGAAGTCTCCAATATTGCATATAGTTCTCCTTAATCCAAATTCATGGTGTTGTTCTGGTGATTGCTTGGAGGGTGCTCCTGAACAGCTTGTAAAGGTCAACTTGCACCCTGTTGTTAAGGTGCTTTTTTCTCATTGCTGCAATGGCAAGGAATATGAGCTAAGTATGACTCAGGATTGGGAAACAAAAAACCGTGCTGATGAAATTTACATGTCGTCCAACGTGAGTAATGAGCTGATCAAATCACTTGAGAGAGCAAAAGACACATTTCCACCATCGTTTAGCTCCTCGGAGGGATTTCTACTATCGTCCATCCTGAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_142947.p1 GENE.S_Transcript_142947~~S_Transcript_142947.p1 ORF type:complete len:548 (+),score=91.96,HECT_2|PF09814.5|1.2e-16 S_Transcript_142947:111-1754(+)
MPPENPRKWNYTWEAQSHLPIIKLFLFNSQINPTSHCNKLQADLKFEKSLIKLTWKELVPPNQVSVVVPLPRVLVDLDSPVNCRAWNDHMEVKIALLLPVDHPIVSSFISELNSGDEAGPCGSSGRYLEPLSMDSDFKNLSCKGDVDIYCRNCAFKLTKGPIRCLVDLPSVNWTDVADNWFGGCCCSFGGISEKLVAKYVKSYRCAEGTCLLTTASVIIFKDDVSCFMSPKVDQTIKCYASGSTDKTCSSEDADARVCHSTESAIVHSTQSQIDNNVVSGGCTPPDDHSRQKSSGTSPGHDYSEHASEHQCCAHGDAESALEDQAIRAPNGLLADQKSFLNCYLGTGFLFRSSGLSKDIEWIDFSCPQCSVIMGAYPCAHDSEPLDGGIRLLKCYITISPPSDSSDDLFSKYTLERMFTCQLLESAKDELSFRTVVKDLKTKSPILHIVLLNPNSWCCSGDCLEGAPEQLVKVNLHPVVKVLFSHCCNGKEYELSMTQDWETKNRADEIYMSSNVSNELIKSLERAKDTFPPSFSSSEGFLLSSILR*

Click here to download the sequence:
Link to NCBI Protein BLAST