Transcript Information: S_Transcript_143118.p1


Annotated TAIR IDAT1G78790.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 69 Blast hits to 69 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29623930-29624785 | Reverse length=104
E-Value4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.012276373178
Replicate 211.601984163866
Replicate 310.016313562645
Condition 2: 8 Hour
Replicate 111.214213873665
Replicate 214.464557310168
Replicate 317.824458773131
Condition 3: 24 Hour
Replicate 112.993939317681
Replicate 214.848704136228
Replicate 310.436708029703


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_143118.p1 GENE.S_Transcript_143118~~S_Transcript_143118.p1 ORF type:complete len:116 (+),score=26.23,CENP-X|PF09415.6|4.7e+03,CENP-X|PF09415.6|9.5e-07 S_Transcript_143118:45-350(+)
ATGGATGAAACCTTCGATCCTAATCTTGTTCACGCCATTTTCAAGCTCATTTGGCGTCGAAAAGCTCTAGAGAGAGAAAGGAACGAAATTTCCGAAACCCTAGACCCTGAGCTGCTGCAGGGAGGACCAGGGACATCTAAGAAAAATCGACCGACATCAGCCAATGCAAATGCTGTAAAAATGAGTTGTGAACTGCTTCTAGTTTTCATCACAGAGGCCATTCAAAGGGCTGCTGCAGTGGCTGAAGCTGAGGGTGTTAGTCAGATAGAAGAGGAAGCTGGTTTTGGAGTATTGCCAAAATTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_143118.p1 GENE.S_Transcript_143118~~S_Transcript_143118.p1 ORF type:complete len:116 (+),score=26.23,CENP-X|PF09415.6|4.7e+03,CENP-X|PF09415.6|9.5e-07 S_Transcript_143118:45-350(+)
MDETFDPNLVHAIFKLIWRRKALERERNEISETLDPELLQGGPGTSKKNRPTSANANAVKMSCELLLVFITEAIQRAAAVAEAEGVSQIEEEAGFGVLPKL*

Click here to download the sequence:
Link to NCBI Protein BLAST