Transcript Information: S_Transcript_143120.p1


Annotated TAIR IDAT1G78790.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 69 Blast hits to 69 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29623930-29624785 | Reverse length=104
E-Value6E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 21.220282653076
Replicate 33.1004869243609
Condition 3: 24 Hour
Replicate 13.1774375986319
Replicate 21.6482772055525
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_143120.p1 GENE.S_Transcript_143120~~S_Transcript_143120.p1 ORF type:5prime_partial len:110 (+),score=12.63 S_Transcript_143120:3-332(+)
TTCAGATTTCTTAATTTCTTCTTTTTCTTTCTCATTGCTTTGTCATTTGTTGAAATTGTGATTATCTCCAATCAGAATCTTGTTCACGCCATTTTCAAGCTCATTTGGCGTCGAAAAGCTCTAGAGAGAGAAAGGAACGAAATTTCCGAAACCCTAGACCCTGAGCTGCTGCAGGGAGGACCAGGGACATCTAAGAAAAATCGACCGACATCAGGTTTGCTAGCTGTAAAGTATCTGATTTTACCATTTGCAACACCCTTCTGGTTATTTGAAATATTTACTCAAACATGCCTGACCAGAGGCCATTCAAAGGGCTGCTGCAGTGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_143120.p1 GENE.S_Transcript_143120~~S_Transcript_143120.p1 ORF type:5prime_partial len:110 (+),score=12.63 S_Transcript_143120:3-332(+)
FRFLNFFFFFLIALSFVEIVIISNQNLVHAIFKLIWRRKALERERNEISETLDPELLQGGPGTSKKNRPTSGLLAVKYLILPFATPFWLFEIFTQTCLTRGHSKGCCSG*

Click here to download the sequence:
Link to NCBI Protein BLAST