Transcript Information: S_Transcript_143123.p1


Annotated TAIR IDAT1G78790.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 69 Blast hits to 69 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29623930-29624785 | Reverse length=104
E-Value2.2E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9409761750135
Replicate 28.7183603896631
Replicate 35.9492697043873
Condition 2: 8 Hour
Replicate 14.4714528084311
Replicate 25.232125891549
Replicate 38.7670018375326
Condition 3: 24 Hour
Replicate 17.3990734403625
Replicate 26.397043590098
Replicate 35.2884931817179


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_143123.p1 GENE.S_Transcript_143123~~S_Transcript_143123.p1 ORF type:5prime_partial len:124 (+),score=22.21,CENP-X|PF09415.6|5.5e-15 S_Transcript_143123:3-374(+)
GTTTGTTTATCCTACGAAGCTTCTCTCTCCAGCATTCACCTAAAACAGGTATTCAATCCGAAAATGGATGAAAACTTCGATCCTAATCTTGTTCACGCCATTTTCAAGCTCATTTGGCGTCGAAAAGCTCTAGAGAGAGAAAGGAACGAAATTTCCGAAACCCTAGACCCTGAGGGAGGACCAGGGACATCTAAGAAAAATCGACCGACATCAGCCAATGCAAATGCTGTAAAAATGAGTTGTGAACTGCTTCTAGTTTTCATCACAGAGGCCATTCAAAGGGCTGCTGCAGTGGCTGAAGCTGAGGGTGTTAGTCAGATAGAAGGTACTCATCTGGAACGAATTCTTCCACAGTTACTCCTTGACTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_143123.p1 GENE.S_Transcript_143123~~S_Transcript_143123.p1 ORF type:5prime_partial len:124 (+),score=22.21,CENP-X|PF09415.6|5.5e-15 S_Transcript_143123:3-374(+)
VCLSYEASLSSIHLKQVFNPKMDENFDPNLVHAIFKLIWRRKALERERNEISETLDPEGGPGTSKKNRPTSANANAVKMSCELLLVFITEAIQRAAAVAEAEGVSQIEGTHLERILPQLLLDF*

Click here to download the sequence:
Link to NCBI Protein BLAST