Transcript Information: S_Transcript_143126.p1


Annotated TAIR IDAT1G78790.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 69 Blast hits to 69 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29623930-29624785 | Reverse length=104
E-Value5E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8712266493486
Replicate 21.5512898907628
Replicate 31.5849226321844
Condition 2: 8 Hour
Replicate 10
Replicate 20.87390033748932
Replicate 31.3322404753113
Condition 3: 24 Hour
Replicate 11.0239789136216
Replicate 21.0623661676413
Replicate 30.78818888765988


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_143126.p1 GENE.S_Transcript_143126~~S_Transcript_143126.p1 ORF type:5prime_partial len:128 (+),score=16.51 S_Transcript_143126:3-386(+)
TTCAGATTTCTTAATTTCTTCTTTTTCTTTCTCATTGCTTTGTCATTTGTTGAAATTGTGATTATCTCCAATCAGAATCTTGTTCACGCCATTTTCAAGCTCATTTGGCGTCGAAAAGCTCTAGAGAGAGAAAGGAACGAAATTTCCGAAACCCTAGACCCTGAGCTGCTGCAGGGAGGACCAGGGACATCTAAGAAAAATCGACCGACATCAGCCAATGCAAATGCTGTAAAAATGAGTTGTGAACTGCTTCTAGTTTTCATCACAGGTTTGCTAGCTGTAAAGTATCTGATTTTACCATTTGCAACACCCTTCTGGTTATTTGAAATATTTACTCAAACATGCCTGACCAGAGGCCATTCAAAGGGCTGCTGCAGTGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_143126.p1 GENE.S_Transcript_143126~~S_Transcript_143126.p1 ORF type:5prime_partial len:128 (+),score=16.51 S_Transcript_143126:3-386(+)
FRFLNFFFFFLIALSFVEIVIISNQNLVHAIFKLIWRRKALERERNEISETLDPELLQGGPGTSKKNRPTSANANAVKMSCELLLVFITGLLAVKYLILPFATPFWLFEIFTQTCLTRGHSKGCCSG*

Click here to download the sequence:
Link to NCBI Protein BLAST