Transcript Information: S_Transcript_143129.p1


Annotated TAIR IDAT1G78790.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 69 Blast hits to 69 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29623930-29624785 | Reverse length=104
E-Value1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.57633550261252
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.35412205588043
Replicate 30.19704722191497


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_143129.p1 GENE.S_Transcript_143129~~S_Transcript_143129.p1 ORF type:5prime_partial len:128 (+),score=12.06 S_Transcript_143129:3-386(+)
GTTTGTTTATCCTACGAAGCTTCTCTCTCCAGCATTCACCTAAAACAGGTATTCAATCCGAAAATGGATGAAAACTTCGATCCTAATCTTGTTCACGCCATTTTCAAGCTCATTTGGCGTCGAAAAGCTCTAGAGAGAGAAAGGAACGAAATTTCCGAAACCCTAGACCCTGAGGGAGGACCAGGGACATCTAAGAAAAATCGACCGACATCAGCCAATGCAAATGCTGTAAAAATGAGTTGTGAACTGCTTCTAGTTTTCATCACAGGTTTGCTAGCTGTAAAGTATCTGATTTTACCATTTGCAACACCCTTCTGGTTATTTGAAATATTTACTCAAACATGCCTGACCAGAGGCCATTCAAAGGGCTGCTGCAGTGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_143129.p1 GENE.S_Transcript_143129~~S_Transcript_143129.p1 ORF type:5prime_partial len:128 (+),score=12.06 S_Transcript_143129:3-386(+)
VCLSYEASLSSIHLKQVFNPKMDENFDPNLVHAIFKLIWRRKALERERNEISETLDPEGGPGTSKKNRPTSANANAVKMSCELLLVFITGLLAVKYLILPFATPFWLFEIFTQTCLTRGHSKGCCSG*

Click here to download the sequence:
Link to NCBI Protein BLAST