Transcript Information: S_Transcript_143169.p1


Annotated TAIR IDAT1G47370.1
Annotated Gene NameToll-Interleukin-Resistance (TIR) domain family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:17365898-17368703 | Reverse length=363
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9506911900132
Replicate 21.7326798081818
Replicate 31.3035441734482
Condition 2: 8 Hour
Replicate 12.5679789387124
Replicate 22.8696873909597
Replicate 33.85024472446
Condition 3: 24 Hour
Replicate 11.6011956485252
Replicate 21.957868539318
Replicate 31.6506573563558


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_143169.p1 GENE.S_Transcript_143169~~S_Transcript_143169.p1 ORF type:complete len:382 (+),score=61.35,Retrotrans_gag|PF03732.13|9.4e+02,Retrotrans_gag|PF03732.13|5.5e-18 S_Transcript_143169:64-1209(+)
ATGCATCAAGATTCTGGTTGTAAGATGCCGCCAAGAGGACGTCGTGGAGGAGTTCACCAATCTCGTCCTGTTCATGATGCTATTTTAGCAGACACGCAACGAGAAATTCAAAGACTCCAACAACGTCTTGCTCAATATGAAGCATCTGCGGGTACTTCTCACGAATCAGAAGGTGAATCATCTGATAATAATATCGAGCCTAATGAGGATGAAAATCCTTTTAGTCAATCAAGAAATGATTCGCCAAGTACAGAAGAGTCAACTTCACAGCACGTTCGTCGCCCCCAGTTCAATGAACGAGAATTGGGAATAAAAATTGAAATTCCCGATTTTGAAGGAGGCGTTCATCCTGAAGAATTTATTGAATGGCTCCATACGGTAGAACGGGTTTTCGATCTTAAAGACATTCCCGATGATCGTAAGGTCAAATTGGTAGCCATTAAACTCAAAAGGCATGCATCCATTTGGTGGGAGAATCTGAAGCACCAAAGAGGAAGAGAAGGTCGTAGAAAAATCCGAACATGGGAAAAAATGAAGCGTGAGCTCAAACGCAAATTTTTACCCAGTCATTACCGCCAAGATATTTTCCTCAAATTTCACAATCTCAAACAAGGAGGAAAATTTGTTGCTGAATATGCTGCCGAATTCGAAGATTTGGCAATGAAGTGTGATAATTCAGAACCAGAAGAGCAAGTCATTGCCAGATTTTTAGCAGGTCTACATCCAAAAATTGCCAATGTCGTGCAACTCCAACAATATTGGACGTTTAACGACGTCATAAAATTATCCTTAAAAGTTGAAAAACAACAAAAGGATAAAGAAGTATTCAAAGAAACTTTTAAAGATCCACCCACATATGGGGATGATTCCGCAAGCCCACCATTAAAAGCCACTACCAGCATTCCACCAAAGAAAGATGAAGTTCCAGCTAGGACAAGCAAGCCTACATCAGGAAGCTCCCGCATGAGAAAATGCTTTAAATGTCAAGGCTTTGAACATATTGCATCTGAGTGTCCCAATGCTAGAATAATCTCCTTTGTTGAGGAAGAAATACCGGTAGAAGAAGCGGCCATTGGAGAAGAAGTTTTTAAAGATGAGAAAGAGCAAAGACGCGAGGTCGAGTCTTCTCCAACAAGGGGAGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_143169.p1 GENE.S_Transcript_143169~~S_Transcript_143169.p1 ORF type:complete len:382 (+),score=61.35,Retrotrans_gag|PF03732.13|9.4e+02,Retrotrans_gag|PF03732.13|5.5e-18 S_Transcript_143169:64-1209(+)
MHQDSGCKMPPRGRRGGVHQSRPVHDAILADTQREIQRLQQRLAQYEASAGTSHESEGESSDNNIEPNEDENPFSQSRNDSPSTEESTSQHVRRPQFNERELGIKIEIPDFEGGVHPEEFIEWLHTVERVFDLKDIPDDRKVKLVAIKLKRHASIWWENLKHQRGREGRRKIRTWEKMKRELKRKFLPSHYRQDIFLKFHNLKQGGKFVAEYAAEFEDLAMKCDNSEPEEQVIARFLAGLHPKIANVVQLQQYWTFNDVIKLSLKVEKQQKDKEVFKETFKDPPTYGDDSASPPLKATTSIPPKKDEVPARTSKPTSGSSRMRKCFKCQGFEHIASECPNARIISFVEEEIPVEEAAIGEEVFKDEKEQRREVESSPTRGV*

Click here to download the sequence:
Link to NCBI Protein BLAST