Transcript Information: S_Transcript_143328.p1


Annotated TAIR IDAT1G12310.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4187500-4187946 | Reverse length=148
E-Value2.1E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1136.4239286619
Replicate 2124.23706741125
Replicate 3106.1800242483
Condition 2: 8 Hour
Replicate 1122.56923366741
Replicate 2114.03126733841
Replicate 3128.92983551362
Condition 3: 24 Hour
Replicate 199.1503206976
Replicate 2112.87898387055
Replicate 3105.41835064468


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_143328.p1 GENE.S_Transcript_143328~~S_Transcript_143328.p1 ORF type:complete len:206 (+),score=43.67,EF-hand_7|PF13499.2|0.00012,EF-hand_7|PF13499.2|1.1e-09,EF-hand_6|PF13405.2|3.8e-07,EF-hand_6|PF13405.2|6.9e-05,EF-hand_6|PF13405.2|2.1e+03,EF-hand_1|PF00036.28|3.3e-06,EF-hand_1|PF00036.28|0.004,EF-hand_1|PF00036.28|3.1,EF-hand_8|PF13833.2|0.023,EF-hand_8|PF13833.2|2.2e+03,EF-hand_8|PF13833.2|2.8e-05,EF-hand_9|PF14658.2|0.19,EF-hand_9|PF14658.2|0.0057,EF-hand_5|PF13202.2|0.0031,EF-hand_5|PF13202.2|12,EF-hand_5|PF13202.2|2.8e+03 S_Transcript_143328:118-735(+)
ATGGTTTCCAATTTCCATCCATTTTTAGATTTTTCAGACCTTGACACTCGCCTTTCTAGGGACTCCCAACATCAAAACCACCTTCACCCTTTCACTTGTCCTTTCAACAACAGCAAAACATTCCTTCCTTCTTCACTCTCCACTCCAAGAAATTCCCACTCAACAACAAAAAAAATGGGGAAAGACTTGAGCGATGATCAAGTGAGTTCAATGAAAGAAGCTTTCACACTCTTTGACACAGACAACGATGGCAAAATCGCACCATCAGAATTGGGGATTCTCATGAGATCATTAGGAGGAAACCCTACACAAGCCCAGTTGAAAGAAATCATAGCCCAAGAGAACCTAAATGCACCCTTTGATTTCAACAGGTTTCTAGATCTGATGGCAAAACACTTAAAGCCTGAGCCTTTTGACAGGCAACTAAGGGATGCCTTTAAAGTACTTGATAAAGAGGGAACTGGGTTCGTTGCTGTTTCGGATCTGAGGCATATTTTGACTAGCATTGGTGAAAAGCTTGAGCCTGCTGAATTTGATGAGTGGATCCGTGAAGTTGAGGTTGGATCTGATGGGAGGATCAAGTATGAAGATTTCATTGCTAGGATGGTCGCTAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_143328.p1 GENE.S_Transcript_143328~~S_Transcript_143328.p1 ORF type:complete len:206 (+),score=43.67,EF-hand_7|PF13499.2|0.00012,EF-hand_7|PF13499.2|1.1e-09,EF-hand_6|PF13405.2|3.8e-07,EF-hand_6|PF13405.2|6.9e-05,EF-hand_6|PF13405.2|2.1e+03,EF-hand_1|PF00036.28|3.3e-06,EF-hand_1|PF00036.28|0.004,EF-hand_1|PF00036.28|3.1,EF-hand_8|PF13833.2|0.023,EF-hand_8|PF13833.2|2.2e+03,EF-hand_8|PF13833.2|2.8e-05,EF-hand_9|PF14658.2|0.19,EF-hand_9|PF14658.2|0.0057,EF-hand_5|PF13202.2|0.0031,EF-hand_5|PF13202.2|12,EF-hand_5|PF13202.2|2.8e+03 S_Transcript_143328:118-735(+)
MVSNFHPFLDFSDLDTRLSRDSQHQNHLHPFTCPFNNSKTFLPSSLSTPRNSHSTTKKMGKDLSDDQVSSMKEAFTLFDTDNDGKIAPSELGILMRSLGGNPTQAQLKEIIAQENLNAPFDFNRFLDLMAKHLKPEPFDRQLRDAFKVLDKEGTGFVAVSDLRHILTSIGEKLEPAEFDEWIREVEVGSDGRIKYEDFIARMVAK*

Click here to download the sequence:
Link to NCBI Protein BLAST