Transcript Information: S_Transcript_143417.p1


Annotated TAIR IDAT5G35460.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2838 (InterPro:IPR021261); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:13672598-13674546 | Forward length=381
E-Value1.3E-214
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3997355356046
Replicate 213.24741448045
Replicate 312.17302006401
Condition 2: 8 Hour
Replicate 133.612204605812
Replicate 232.545360383178
Replicate 331.056201808582
Condition 3: 24 Hour
Replicate 115.431264275916
Replicate 215.309329674089
Replicate 315.75681802792


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_143417.p1 GENE.S_Transcript_143417~~S_Transcript_143417.p1 ORF type:5prime_partial len:453 (+),score=44.04,DUF2838|PF10998.4|1.4e+04,DUF2838|PF10998.4|5.5e-43,DUF2838|PF10998.4|1.3e+04,DUF2838|PF10998.4|3.8e+03 S_Transcript_143417:2-1360(+)
AGAAACCTATCAAAATCAATAAAATATATATATATATATATATTGTTAGAACACGGTTGTATTAATACCAAGCACAAAGACAAAAACTTGCTTCTTTCCAACAGATTAAAAACCACAATATCAATCTGCACCCAAAAAAAAAAAACAAAATATCTATCTATCTTTATTCTCTTTTTGGCTTGCTTGCTTTGCAGTCAAGGAATAATAATGTCAACCAGCGATGATGGTATTGAAGAACCCAATGAACATTCATTTGAGAGAGTTAAGCAAAGGATTAAGGATCGATCCAAGAAAGTTGCTGAAACAAAAGAAAAGACTAAGAAGATAATCTCTGAACATGCTGAAAGGATTGCAAGACAAGCAGAAGAACATGAAAGATTCATCAACAAGGTGACTTATCTTTGTGGTGTACTTGGGTTTGGAGGATTTTGCTTCTTACTTGGGGCAAGGCCACAGGATATCCCATATGTCTACTGCCTATTTTATGTCACATTTGTTCCGCTCCGATGGATATATTACCGTTACAAGAAGTGGCATTACTATCTATTGGATTTCTGCTACTATGCTAATACAATATTCTTGGTCACTCTTCTTATGTATCCAAAAAATGAAAAGCTTTTCATGGTTTGCTTTTCATTTGCTGAGGGGCCATTAGCTTGGGCAATTATTGTGTGGAGGTGTAGCTTGGTTTTCAATTCCATTGATAAAATTACAAGTGTGCTTATACACTTATTACCTGGTCTGGTTTTCTTTACCATTCGCTGGTGGAATCCAACCACCTTTGCAGCTATGCATCCTGAAGGCACTGCTCAGAGAGTCTCATGGCCTTACATAGAAAACAAATCGTACCTGTGGACGTGGCTGTTTCTAGTCCCCTTATTTGCTTATACCCTGTGGCAAGTTCTCTATTTTTTGATTGTTAATGTTCTCCGCAGACAGAGGCTGTTAAGAGATCCAGAAGTCATGACTTCTTACAGGGAACTTTCAAAGAAAGCTCAGAAATCAAACAGTATATGGTGGCGTCTTAGTGGTTTGCTTGGGGATCAGAATCGTGTTTTCATGTACATTCTTTTTCAAGCCCTGTTCACTGTTGCAACCATGGCACTTACTGTCCCGATCTTTCTGTCATACGAACTGCACGTTGTCTTCCAAATTCTGAAGGCGGCAGCAGCTGTGTGGAACGGGGCTAGCTTCGTGCTAGAGGTGATGCCTAGACAGGTTATTCAGAAGGAGAAGAAGAAAAAAGAGATGAAACCACTTGAAGCACAGCTAAATGGGTCATCTCCGCCAATGAGTTCAGACGAAAATAATCAACTTGGCAGTACAGAAATCCCTAACAACAGTTCAGAGACAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_143417.p1 GENE.S_Transcript_143417~~S_Transcript_143417.p1 ORF type:5prime_partial len:453 (+),score=44.04,DUF2838|PF10998.4|1.4e+04,DUF2838|PF10998.4|5.5e-43,DUF2838|PF10998.4|1.3e+04,DUF2838|PF10998.4|3.8e+03 S_Transcript_143417:2-1360(+)
RNLSKSIKYIYIYILLEHGCINTKHKDKNLLLSNRLKTTISICTQKKKTKYLSIFILFLACLLCSQGIIMSTSDDGIEEPNEHSFERVKQRIKDRSKKVAETKEKTKKIISEHAERIARQAEEHERFINKVTYLCGVLGFGGFCFLLGARPQDIPYVYCLFYVTFVPLRWIYYRYKKWHYYLLDFCYYANTIFLVTLLMYPKNEKLFMVCFSFAEGPLAWAIIVWRCSLVFNSIDKITSVLIHLLPGLVFFTIRWWNPTTFAAMHPEGTAQRVSWPYIENKSYLWTWLFLVPLFAYTLWQVLYFLIVNVLRRQRLLRDPEVMTSYRELSKKAQKSNSIWWRLSGLLGDQNRVFMYILFQALFTVATMALTVPIFLSYELHVVFQILKAAAAVWNGASFVLEVMPRQVIQKEKKKKEMKPLEAQLNGSSPPMSSDENNQLGSTEIPNNSSETM*

Click here to download the sequence:
Link to NCBI Protein BLAST