Transcript Information: S_Transcript_143440.p1


Annotated TAIR IDAT1G48870.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18072325-18074457 | Reverse length=593
E-Value1.7E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3589224859936
Replicate 23.4629297525549
Replicate 33.5811138026409
Condition 2: 8 Hour
Replicate 13.6232459276682
Replicate 22.7874309793834
Replicate 33.0697579884196
Condition 3: 24 Hour
Replicate 13.3226845438768
Replicate 23.3739007524659
Replicate 32.163055588141


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_143440.p1 GENE.S_Transcript_143440~~S_Transcript_143440.p1 ORF type:complete len:618 (+),score=116.27,WD40|PF00400.28|4.3e-06,WD40|PF00400.28|7.3e-07,WD40|PF00400.28|0.0058,WD40|PF00400.28|18,WD40|PF00400.28|1.2e+03,WD40|PF00400.28|38,WD40_like|PF17005.1|35,WD40_like|PF17005.1|2.3e-05,Ge1_WD40|PF16529.1|0.00059,Ge1_WD40|PF16529.1|4e+02,Ge1_WD40|PF16529.1|50,Ge1_WD40|PF16529.1|2e+02 S_Transcript_143440:788-2641(+)
ATGGAAATGCAAGAAATGGTGAACTTTGTTGAGTCAGAAGAAGATTTGTTCTTTGATTCTGTGGATGAATTGTCAGATGAAGTGTGGAGTAATGAGCTAAGGAGTGTGAAGGAAAGGCGCGAGGCTTTCCTGTACGAAATGGGTTTCGTTGAGGCTAGAAATTCGGGTGAGTCTAATGATGATGCTTCATTGGAAAGGATGGTGGAAAGAACAAGAGAGGTGTCGAGTTCATGTTCTTCTTCGTCTTCAGATGATTACGATGAGGTGTTTTATGGAAGGGATTGTGATGGGGGTGTTAGTAATTTGGCGGTTGATGAATGTGAGCATAGTGAGCCAATCAGGCCATGTATGGATGTATGTAGAGATGATGGGGAGCCTTCACCATCAGAAGAATGTACAGTTGTCAGATCTGTAAACAAGAAAATTGGGAATTGGTGGAAAGAAATGATGAGCAAGGAGAGGGGAATGGTTAGTAGGTATAAATGTGAGTCAGTAAAGGGGGAGAAGAAGAAATCCGATACTAATAGAAGCGAAGTTCGTTTGCACAAAAAGAGATTCAAAGAGCTCAGTGCCTTGTATACAATGCAGGAGATCCGAGCTCACAAGGGTGTCATTTGGACTATGAAATTCAGTCCAGATGGTCAGTATCTTGCCAGTGGTGGCCAAGATGGTGTTGTTCGGGTTTGGCAAGTTAAGTCGTTGGATGCTTGTCCCGAGAGGTTTAGAGATGAATTTGATTCCACTCCTAGGGGAGACGTCAAAACCGGGTTTGGAAGAGAAAAGAAGGCAAAAGATCCTGTATTTCTTCCTGATAAAATGTTGCACATTCAAGAGCAGCCTGTACATGAGTTTCATGGCCATGTTAGTGATGTCTTAGACCTCGCTTGGTCCGACTCTAATTGTCTGCTATCATCGTCAACAGATAAAACTGTTCGATTGTGGCAAGTTGGATCTGATGAATGCCTCAATGTCTTCCATCACACAGATTATGTGACATGCGTCCAATTCAATCCCATCGACAACAATCAGTTCATAAGCGGTTCCTTAGATGGGAAAGTTCGTACTTGGGGTTTGTCGAAGGGACGAGTGATTGACTGGGCTGATGTTGGAGATGCAGTCACAGCTGTTTGTTACCAGCCTGATGGACAAGGCTTTGTGGTGGGATCTCTCGGAGGCACCTGCCGATTCTATGAAGTTAAAGGTGACTTGGTCGAGCTTACTGCACATATTCTAATTCACAGTAACAGAAGGCTGTCCACAAACAGGATTACAGGAATAAAGTTTTCTCCAGAGGACTCTCGGACAGTGATGGTCATGTCCGAAGATTCTAAACTGCGGATATTTGACAAGATGGATGTTGTCTGTAAATACCGAGGTCTTCCAAAATCAGGAACTCAAATGTCAGCATCATATACGTCAGATGGAAGACATATAATCTCCATCGGAGAGGATTCTCATGTCTATATCTGGAATAACGAGCACCCAAGTATCTTATCATCAAAACACGAAAAATCTGTTCGTTCTTGCGAGCACTTCTATGCTGAAGGTGTGTCTGTTGCAGTGCCCTGGTGTGGTACCGAAACAAGGCCAAAGGTTTCTTGTGGTAGCTGGAGCACCAAGCATGAAGTTGCATCCAAATCAGTCCCACATTTCTCCTTCAGTAAGCTGTTCTCATCTCGAAGCTCTGCAACATGGCCGGAGGAATTGCTTCCCGAGTTCAGTTCACCCCTAGACCAAGGTCAAGGGGCTCAACAGGCCATTCTTCCTTCGACATGGGGGCTCGTGATTGTCACAGCTAATATACATGGAGTGATCAAGACATTCCACAATTATGGTCTCCCTGTTAGAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_143440.p1 GENE.S_Transcript_143440~~S_Transcript_143440.p1 ORF type:complete len:618 (+),score=116.27,WD40|PF00400.28|4.3e-06,WD40|PF00400.28|7.3e-07,WD40|PF00400.28|0.0058,WD40|PF00400.28|18,WD40|PF00400.28|1.2e+03,WD40|PF00400.28|38,WD40_like|PF17005.1|35,WD40_like|PF17005.1|2.3e-05,Ge1_WD40|PF16529.1|0.00059,Ge1_WD40|PF16529.1|4e+02,Ge1_WD40|PF16529.1|50,Ge1_WD40|PF16529.1|2e+02 S_Transcript_143440:788-2641(+)
MEMQEMVNFVESEEDLFFDSVDELSDEVWSNELRSVKERREAFLYEMGFVEARNSGESNDDASLERMVERTREVSSSCSSSSSDDYDEVFYGRDCDGGVSNLAVDECEHSEPIRPCMDVCRDDGEPSPSEECTVVRSVNKKIGNWWKEMMSKERGMVSRYKCESVKGEKKKSDTNRSEVRLHKKRFKELSALYTMQEIRAHKGVIWTMKFSPDGQYLASGGQDGVVRVWQVKSLDACPERFRDEFDSTPRGDVKTGFGREKKAKDPVFLPDKMLHIQEQPVHEFHGHVSDVLDLAWSDSNCLLSSSTDKTVRLWQVGSDECLNVFHHTDYVTCVQFNPIDNNQFISGSLDGKVRTWGLSKGRVIDWADVGDAVTAVCYQPDGQGFVVGSLGGTCRFYEVKGDLVELTAHILIHSNRRLSTNRITGIKFSPEDSRTVMVMSEDSKLRIFDKMDVVCKYRGLPKSGTQMSASYTSDGRHIISIGEDSHVYIWNNEHPSILSSKHEKSVRSCEHFYAEGVSVAVPWCGTETRPKVSCGSWSTKHEVASKSVPHFSFSKLFSSRSSATWPEELLPEFSSPLDQGQGAQQAILPSTWGLVIVTANIHGVIKTFHNYGLPVRV*

Click here to download the sequence:
Link to NCBI Protein BLAST