Transcript Information: S_Transcript_143536.p1


Annotated TAIR IDAT5G45400.1
Annotated Gene NameReplication factor-A protein 1-related
Annotated Gene Symbol(s)RPA70C, ATRPA70C
Annotation TypeHomolog
Chromosome Positionchr5:18398990-18401644 | Forward length=853
E-Value1E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6728172204971
Replicate 21.7650231646012
Replicate 31.475418886688
Condition 2: 8 Hour
Replicate 11.8278905986114
Replicate 21.7258283236361
Replicate 32.1315847604981
Condition 3: 24 Hour
Replicate 10.93620929245404
Replicate 21.4245824419418
Replicate 31.0809447602193


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_143536.p1 GENE.S_Transcript_143536~~S_Transcript_143536.p1 ORF type:3prime_partial len:350 (+),score=62.35,Rep-A_N|PF04057.8|9.8e-27,tRNA_anti-codon|PF01336.21|1.5e-10 S_Transcript_143536:234-1280(+)
ATGGCGATTAATTTGTCGCAAGGAGTATTAGAATTGATGTGCGCACCGAAAACTGACGACGCTCCATATCAACCTCCGGTTGATCCAGTACTTCAAGTGAGTGAACTTAGGCTAGTGCAAACCCAAAATCAGTCGCACAATGCGACCGAAAGGTACCGTCTTATGTTGTCTGACGGAGTTCAATTGCAACAAGGGATGCTTGCTACTCAGCGCAATGATCTTGTTAGGGATGGCAAGTTAATTAGGGGTTCTATTATTCGCTTGTCTCAGTACGTTTGCAATGTCATCCAACAACGATCCATTATAATAATCATTGACTTGGAAGTGGTAATGGAGACATATGAAATGATTGGAAATCCAAAGCTGCCTGGTGGTGCAAGAGCTACTGCACAAGTACCATCGTCTGCAGGGCAAACAGGGATGATGCCTTCAAATGCACAATATGGAACTCCACTTCCATCAGGCAGCGGCCCCATTTCTAGGCCAAATGGCAATTCACCTCAAATCAAGCCAGAGCATGGTGCTAAAATGCAATCTTATGGGGGGCTTCCTGCAAGCAATCAGGATTCAGGACTTTATAATATAAACAGTGGACCCACAGGAGGTTACCCTAAACAAGAGTTTGGTGTGGGTAATACCAGGAATGCTGCTGTTGGTGTTTCATATGGGGGTTTCCAGAATTCCAGAACAGATGTCTCACGTGCTCCTGCAAATTCTTATCCCCGCTCCCAGCAACCTCCTTATCCGCAGCAACCTCCTATGCACATGAACAGGGGTCCCATTGCTAGGAATGAAGCTGCTCCAAGGATAATTCCTATTGCTGCTTTAAATTTTTACCAAGCTCGATGGACAATCAAGGCTAGAGTGACCACAAAGAGTGAACTTAGGCACTACAGCAATGTACGCGGGGAAGGGAAAGTGTTTTCCTTTGATCTGCTAGATTCAGATGGTGGAGAAATCCGAGTTACCTGCTTCAATGCTGTTGCTGATCAATTCTACAATCAAATTGAGGCTGGTAAGGTGTACTTGATTTCCAAAGGAACTGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_143536.p1 GENE.S_Transcript_143536~~S_Transcript_143536.p1 ORF type:3prime_partial len:350 (+),score=62.35,Rep-A_N|PF04057.8|9.8e-27,tRNA_anti-codon|PF01336.21|1.5e-10 S_Transcript_143536:234-1280(+)
MAINLSQGVLELMCAPKTDDAPYQPPVDPVLQVSELRLVQTQNQSHNATERYRLMLSDGVQLQQGMLATQRNDLVRDGKLIRGSIIRLSQYVCNVIQQRSIIIIIDLEVVMETYEMIGNPKLPGGARATAQVPSSAGQTGMMPSNAQYGTPLPSGSGPISRPNGNSPQIKPEHGAKMQSYGGLPASNQDSGLYNINSGPTGGYPKQEFGVGNTRNAAVGVSYGGFQNSRTDVSRAPANSYPRSQQPPYPQQPPMHMNRGPIARNEAAPRIIPIAALNFYQARWTIKARVTTKSELRHYSNVRGEGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIEAGKVYLISKGTV

Click here to download the sequence:
Link to NCBI Protein BLAST