Transcript Information: S_Transcript_143695.p1


Annotated TAIR IDAT5G46100.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18694316-18695734 | Reverse length=472
E-Value1.9E-207
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7742000823454
Replicate 21.4234057779042
Replicate 31.7451191132869
Condition 2: 8 Hour
Replicate 13.2102738111813
Replicate 23.3678051715717
Replicate 33.6672425987065
Condition 3: 24 Hour
Replicate 11.597260298237
Replicate 21.4621813920224
Replicate 31.8441924941375


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_143695.p1 GENE.S_Transcript_143695~~S_Transcript_143695.p1 ORF type:complete len:465 (+),score=78.96,PPR_2|PF13041.2|35,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|0.47,PPR_2|PF13041.2|1e-10,PPR_2|PF13041.2|2.1e-15,PPR_2|PF13041.2|1.7e-15,PPR_2|PF13041.2|5.1e-20,PPR_2|PF13041.2|1.1e-18,PPR_2|PF13041.2|1.3e-13,PPR_2|PF13041.2|3.6e-05,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|0.00018,PPR_1|PF12854.3|8.6e+02,PPR_1|PF12854.3|8.6,PPR_1|PF12854.3|4.5e+03,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|6e-08,PPR_1|PF12854.3|8.5e-16,PPR_1|PF12854.3|3.9e-11,PPR_1|PF12854.3|8.1e-12,PPR_1|PF12854.3|1.8e-12,PPR_1|PF12854.3|0.0079,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|15,PPR_1|PF12854.3|1.7e-05,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.0014,PPR|PF01535.16|29,PPR|PF01535.16|0.12,PPR|PF01535.16|0.013,PPR|PF01535.16|1.9e-10,PPR|PF01535.16|1.7e-08,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|5.9e-08,PPR|PF01535.16|0.85,PPR|PF01535.16|8.1e+02,PPR|PF01535.16|2.9e-05,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|25,PPR_3|PF13812.2|7.7e-05,PPR_3|PF13812.2|1.3e-05,PPR_3|PF13812.2|0.0067,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|1.5e-05,PPR_3|PF13812.2|3.5,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.58,TPR_19|PF14559.2|0.37,TPR_19|PF14559.2|1.9e+03,TPR_19|PF14559.2|4.9e+02,TPR_19|PF14559.2|96,TPR_19|PF14559.2|1.3e+02,TPR_19|PF14559.2|7.9e+02 S_Transcript_143695:207-1601(+)
ATGGGCAGCAAAATGGCGATCAAATGGTCCAAAAAAATCACCGCAAAACAAGTAGAACAGCTAATTAGAGCTGAAAAGGACTTGCACAAAGCTATTGAAATATTTGAATCAGCAACAGCTGAGTACAAAAATGGGTTTAGGCATGACCAAACCACTTTTGGGCTTATGATTTCTAGATTAGTTTCTGCCAACCAGTTTAGATCAGCAGAAGAGCTCCTTCACAGAATGAAGGAAGAGCGGTGTCTTATTAGTGAAGATGTTTTCCTTTCAGTTTGTAGGGCATATGGTCGCGTTCATAAGCCACTCGAGGCTGTTAGGGTTTTCGAGAGTGCTAAGGAGTTTGAGTGTGAGCTCACTGAGAAATCATATGTTACGCTGTTCTCCATTCTTGTTGATGAAAACCAGCTCAAGATGGCCTTTAGGTTTTATAGGTATATGAGGGAAATGGGTATTGCGCCAACTGTTGTTTCTCTCAACATTTTGATCAAGGCATTGTGTAAGAATAGTGGGACTGTTGATTCAGCTATTAATATATTTCGTGAGATGCCAAATCGTGGGTGTCCTCCTGATTCATACACGTATGGTACTTTGATTAGTGGGTTGTGTAGATTTGGAAGGACGGATGAGGCGGTCAAGCTTTTTAGAGAGATGGAGACTAAAGGTTGTACAGCTAGTGTCGTAACTTATACTTCTTTGCTACATGGTCTATGCCAGTCTGAAAAGTTAGGTGAAGCTCTGAAGTTGTTTAAAGAGATGACGAGGAAGAGCATTAAACCGAATGTGTTTACCTATAGTTCATTGATGGATGGTCTTTGTAAACATGGGCGTTCTTCTGATGCCTTGGAACTACTTGAGGTGATGGTAAGCCAACGTCTTTCTCCAAACATGGTTACTTATAGTACTCTCATTCATGGACTTTGTAAAGATAGGGATCTTCCTCAAGCTTTGGAGCTTTTTGATAGGATGAAACTTCAAGGTCTAAAGCCTGATGCAGGATTGTATGGGAAGATCATAACTGGCTTATGTGACTTGAAAAAGTTTCAACAAGCTGCGAACTTCCTTGATGAAATGGTCCTCGCAGGAATCTCACCCAATAGATTGACATGGAGCATTCATGTTAGGACTCATAATACTGTGATACTAGGTCTTTGTGAGACTGATTTGAATCGTGCTTTTCATTCGTATCTAAGTATGAGAACCAGGGGCCTTTCAGTGGAGCCTGAGGTTTTTAGCTCACTTATTGAAGGCTTCTGCAAGAAAGAAGACTTCCACAAAGCTTGTTCCATTGTTGATGAGATGGTTTGTGCTGGCTGCATGAGTGCATTCCTAATGAGGACATGTGGAAGGGTATCTTGGGTGTTTTTTGTGATCAAAGGAAGATGTGGGATCTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_143695.p1 GENE.S_Transcript_143695~~S_Transcript_143695.p1 ORF type:complete len:465 (+),score=78.96,PPR_2|PF13041.2|35,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|0.47,PPR_2|PF13041.2|1e-10,PPR_2|PF13041.2|2.1e-15,PPR_2|PF13041.2|1.7e-15,PPR_2|PF13041.2|5.1e-20,PPR_2|PF13041.2|1.1e-18,PPR_2|PF13041.2|1.3e-13,PPR_2|PF13041.2|3.6e-05,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|0.00018,PPR_1|PF12854.3|8.6e+02,PPR_1|PF12854.3|8.6,PPR_1|PF12854.3|4.5e+03,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|6e-08,PPR_1|PF12854.3|8.5e-16,PPR_1|PF12854.3|3.9e-11,PPR_1|PF12854.3|8.1e-12,PPR_1|PF12854.3|1.8e-12,PPR_1|PF12854.3|0.0079,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|15,PPR_1|PF12854.3|1.7e-05,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.0014,PPR|PF01535.16|29,PPR|PF01535.16|0.12,PPR|PF01535.16|0.013,PPR|PF01535.16|1.9e-10,PPR|PF01535.16|1.7e-08,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|5.9e-08,PPR|PF01535.16|0.85,PPR|PF01535.16|8.1e+02,PPR|PF01535.16|2.9e-05,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|25,PPR_3|PF13812.2|7.7e-05,PPR_3|PF13812.2|1.3e-05,PPR_3|PF13812.2|0.0067,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|1.5e-05,PPR_3|PF13812.2|3.5,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.58,TPR_19|PF14559.2|0.37,TPR_19|PF14559.2|1.9e+03,TPR_19|PF14559.2|4.9e+02,TPR_19|PF14559.2|96,TPR_19|PF14559.2|1.3e+02,TPR_19|PF14559.2|7.9e+02 S_Transcript_143695:207-1601(+)
MGSKMAIKWSKKITAKQVEQLIRAEKDLHKAIEIFESATAEYKNGFRHDQTTFGLMISRLVSANQFRSAEELLHRMKEERCLISEDVFLSVCRAYGRVHKPLEAVRVFESAKEFECELTEKSYVTLFSILVDENQLKMAFRFYRYMREMGIAPTVVSLNILIKALCKNSGTVDSAINIFREMPNRGCPPDSYTYGTLISGLCRFGRTDEAVKLFREMETKGCTASVVTYTSLLHGLCQSEKLGEALKLFKEMTRKSIKPNVFTYSSLMDGLCKHGRSSDALELLEVMVSQRLSPNMVTYSTLIHGLCKDRDLPQALELFDRMKLQGLKPDAGLYGKIITGLCDLKKFQQAANFLDEMVLAGISPNRLTWSIHVRTHNTVILGLCETDLNRAFHSYLSMRTRGLSVEPEVFSSLIEGFCKKEDFHKACSIVDEMVCAGCMSAFLMRTCGRVSWVFFVIKGRCGIC*

Click here to download the sequence:
Link to NCBI Protein BLAST