Transcript Information: S_Transcript_143892.p1


Annotated TAIR IDAT5G06300.1
Annotated Gene NamePutative lysine decarboxylase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1922042-1925278 | Reverse length=217
E-Value4.7E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.95695653923
Replicate 219.036477715555
Replicate 316.402610410636
Condition 2: 8 Hour
Replicate 19.4360134146606
Replicate 210.69097191633
Replicate 312.544281997622
Condition 3: 24 Hour
Replicate 136.247041190145
Replicate 227.477364477518
Replicate 323.994422774779


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_143892.p1 GENE.S_Transcript_143892~~S_Transcript_143892.p1 ORF type:complete len:226 (+),score=37.70,Lysine_decarbox|PF03641.10|4.9e-44 S_Transcript_143892:389-1066(+)
ATGGAAAGAGATGAAGAGCAACACAAACAAAGCATGAACAAGTCCAGATTCAACCGGATTTGTGTCTTTTGTGGTAGCAGCCCTGGCAAGAACCCTAGCTATCAACTTGCTGCCATCCAGCTCGGTAATCAATTGGTGGAAAGTAAAATTGACTTGGTATATGGAGGAGGGAGCATTGGGTTGATGGGTTTGGTCTCTCAAGCTGTCTATAATGGTGGTCGCCACGTCTTGGGGGTGATCCCAAAGACCCTAATGCCTAAAGAGATAACTGGTGGGACGATTGGAGAAGTGAGAGCTGTGTCGGGTATGCATCAAAGAAAAGCAGAGATGGCTCGCCAAGCTGACGCTTTCATTGCCTTACCAGGTGGTTATGGCACATTGGAGGAACTATTGGAAGTGATCACTTGGGCTCAATTAGGGATTCATGATAAGCCGGTGGGCTTGTTGAATGTGGACGGGTATTACAACTCGTTATTAAGCTTCATAGACAAGGCAGTTGATGAAGGATTCGTTACCCCAGCTGCCCGTAACATTATTGTATCTGCCCCAACTGCCCAAGAACTTATGTCCAAGCTTGAGAGTTATGTTCCTAAACATTACGACACAGCGCCAAAGCTGAGCTGGGAGATGGAGCAACAGCTAGGATATTGTACAGCCAAGTCCGACATCTCTCGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_143892.p1 GENE.S_Transcript_143892~~S_Transcript_143892.p1 ORF type:complete len:226 (+),score=37.70,Lysine_decarbox|PF03641.10|4.9e-44 S_Transcript_143892:389-1066(+)
MERDEEQHKQSMNKSRFNRICVFCGSSPGKNPSYQLAAIQLGNQLVESKIDLVYGGGSIGLMGLVSQAVYNGGRHVLGVIPKTLMPKEITGGTIGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFVTPAARNIIVSAPTAQELMSKLESYVPKHYDTAPKLSWEMEQQLGYCTAKSDISR*

Click here to download the sequence:
Link to NCBI Protein BLAST