Transcript Information: S_Transcript_144095.p1


Annotated TAIR IDAT5G48150.1
Annotated Gene NameGRAS family transcription factor
Annotated Gene Symbol(s)PAT1
Annotation TypeOrtholog
Chromosome Positionchr5:19522497-19524053 | Reverse length=490
E-Value7.9E-170
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3426937707025
Replicate 23.495864542564
Replicate 32.9222645202888
Condition 2: 8 Hour
Replicate 14.0923724376188
Replicate 23.6629963441806
Replicate 33.8653737734385
Condition 3: 24 Hour
Replicate 12.3844767190437
Replicate 22.4738667565731
Replicate 32.1314403722633


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144095.p1 GENE.S_Transcript_144095~~S_Transcript_144095.p1 ORF type:complete len:568 (+),score=105.83,GRAS|PF03514.10|1.5e-126 S_Transcript_144095:342-2045(+)
ATGGACTCACACCAGATATTTGGATCATTGAAGTTTAACTTTAGAGCTTCTCCCATCTCGCCCTTCTCGACTCACTTTGATTGTGATACAGCCGCTACATTGAGTGACAGCCAAGAGCGTAACAGCTCAACGGAGAGTGTATCCACAAAAAGCACATCTTGTAATTCCTCCCTTGAGACAAGTAGTTGCTATCATCGTCTAAACTCGAGCCCTCCAGGAGATTCTCCCGAAGAAACTGTTCTACTGTCTACTAGCGGGAGTTGGTTTAGACAAACTGCAGACTATGGAATCAACGACATGAAACATGCGTTGTTGGAGCTGGAGACCGCTCTAATGGGAACAGGTGTTGAGGAAAACCAACCAACTGCTTCCAATCTGTCTATGGGGGATACCCGGCTGCCTCAAATTCCGAGTCAGAGATCCAGGTCATGGAATCGTGACCAACGGAGTTCACATTCTGATACAGCCCAGTCATCATCTGGATTGTTGGGGGGACGACGATCAGGGAAGGAAGGTCAGAGTGAGAAACGTCACAAGGGTATGGAACAACAGAAACAATCAGTGCAACTCAGCTTGCCACCTGGCAATTTGAAACAGCTGTTGATTGAATGTGCAAGGGCCTTATCTGAGAACCGAGTAGATGATTTTGAGAAGTTAGCTGAAAAGGTGAGGGGGGAGGTCTCAATCTCTGGAGAGCCAATCCAGCGTCTTGGTGCTTACATGCTCGAAGGTTTAGTCGCAAGGAAGGAGTCTTCAGGAGCCAACATCTACAAGGCTCTCAGGTGTAAAGAGCCTCTCGGCAAGGACCTACTCTCATTCATGCACATCCTTTATGAAATATGCCCGTACTTGAAGTTTGGTTACATGGCTGCGAATGGAGCAATTGCTGAAGCCTGCAGAAATGAGGACAGGATACATATCATCGATTTCCAGATTGCACAGGGGACTCAGTGGTTGACGCTGCTGCAAGCACTAGCTGCAAGGCCGAATGGACCTCCGACTGTGAGGATCACAGGCATTGACGATCCTGTTTCAAAGTATGCTCGGGGAGCAAGCTTGGATGCTGTTGGGGAGAGGCTGGCAGCTCTCTCTGAGAAGCACAAAATATCTGTCGAGTTCAATGCAGTGCCTGTGTTTGGACCTGATGTTACGCGAGAAATGCTTGATATTCGACCAGGGGAAGCTCTAGCTGTGAACTTCCCTTTGCAGCTCCACCATACCCCTGACGAGAGTGTTGATGTGAACAATCCAAGGGACGAGCTTCTCAGGATGGTGAAATCACTAGTTCCTAAGGTGATCACATTGGTTGAGCAAGAGTCCAACACCAACACCACCCCTTTCTTGACGAGGTTCATAGAAACACTCGAGTACTACTCAGCTATGTTCGAATCGATAGACGTTAAAATGCCTAGGGATCGGAAGGAGAGGATCAATGTGGAGCAGCACTGCTTGGCTAAGGACATTGTGAACATCATTGCTTGTGAGGGTAAGGACAGGGTCGAGAGGCATGAACTCTTCGGAAAGTGGAAATCAAGGTTGACTATGGCAGGGTTTCAGCAGTATCCATTGAGCTCGTATGTCAACTCTGTTATACGAGGCCTGCTTAGGTGTTACTCGGAGCACTACACCTTGGTGGAGAAGGATGGCGCGATGCTTCTGGGTTGGAAGGACCGAATGTTGATTTCAGCTTCAGCATGGCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144095.p1 GENE.S_Transcript_144095~~S_Transcript_144095.p1 ORF type:complete len:568 (+),score=105.83,GRAS|PF03514.10|1.5e-126 S_Transcript_144095:342-2045(+)
MDSHQIFGSLKFNFRASPISPFSTHFDCDTAATLSDSQERNSSTESVSTKSTSCNSSLETSSCYHRLNSSPPGDSPEETVLLSTSGSWFRQTADYGINDMKHALLELETALMGTGVEENQPTASNLSMGDTRLPQIPSQRSRSWNRDQRSSHSDTAQSSSGLLGGRRSGKEGQSEKRHKGMEQQKQSVQLSLPPGNLKQLLIECARALSENRVDDFEKLAEKVRGEVSISGEPIQRLGAYMLEGLVARKESSGANIYKALRCKEPLGKDLLSFMHILYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWLTLLQALAARPNGPPTVRITGIDDPVSKYARGASLDAVGERLAALSEKHKISVEFNAVPVFGPDVTREMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDELLRMVKSLVPKVITLVEQESNTNTTPFLTRFIETLEYYSAMFESIDVKMPRDRKERINVEQHCLAKDIVNIIACEGKDRVERHELFGKWKSRLTMAGFQQYPLSSYVNSVIRGLLRCYSEHYTLVEKDGAMLLGWKDRMLISASAWH*

Click here to download the sequence:
Link to NCBI Protein BLAST