Transcript Information: S_Transcript_144238.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0395703607492
Replicate 20.51709663025425
Replicate 30.28816775130626
Condition 2: 8 Hour
Replicate 10.66641844741041
Replicate 21.3982405399829
Replicate 31.1657104158974
Condition 3: 24 Hour
Replicate 11.5359683704324
Replicate 21.4164882235217
Replicate 30.39409444382994


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144238.p1 GENE.S_Transcript_144238~~S_Transcript_144238.p1 ORF type:5prime_partial len:128 (-),score=7.42,zf-RVT|PF13966.2|4.5e-06,zf-RVT|PF13966.2|2.7e+03 S_Transcript_144238:139-522(-)
AAGTGTTTCATGTGTCACAAAAGTGGGGAGACAGCCTCTCATCTCTTTCTCCATTGTCCTATTGCGCGGTTTGTGTGGGCTTTGCTCTTTGGTGTGCGTGGGGAAGCCCTGGTCTGGCCGTCCATAGTTTTGGAGTTCCTCCAGGTTTACTTTTGGGGGTTTAGTAGGGATAAGGACTTGGGTGTGTTATGGCGGAACGCGATTTTTGCTACTTTGTGGTGTATTTGGTTGGAGCGCAATGCTAGGGTGTTTCAGCAAGTTGCTCTCCCTACTTCCCTTACATGGGAGTGTATCGCCTTCTTAGCTTCCTTGTGGAGTAAGGCTGGCGGGGCTTTCCGTAGTTATTCTATTTCTGATGTACAACATAACTGGTCGTGTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144238.p1 GENE.S_Transcript_144238~~S_Transcript_144238.p1 ORF type:5prime_partial len:128 (-),score=7.42,zf-RVT|PF13966.2|4.5e-06,zf-RVT|PF13966.2|2.7e+03 S_Transcript_144238:139-522(-)
KCFMCHKSGETASHLFLHCPIARFVWALLFGVRGEALVWPSIVLEFLQVYFWGFSRDKDLGVLWRNAIFATLWCIWLERNARVFQQVALPTSLTWECIAFLASLWSKAGGAFRSYSISDVQHNWSCL*

Click here to download the sequence:
Link to NCBI Protein BLAST