Transcript Information: S_Transcript_144361.p1


Annotated TAIR IDAT1G56420.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12530.1); Has 58 Blast hits to 58 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:21122772-21124234 | Reverse length=183
E-Value5E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1724107432665
Replicate 21.6072230803488
Replicate 31.2213732505696
Condition 2: 8 Hour
Replicate 12.5420995080026
Replicate 22.3705270081829
Replicate 31.8351391977798
Condition 3: 24 Hour
Replicate 11.5913491284539
Replicate 21.5009146739303
Replicate 34.17583516641


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144361.p1 GENE.S_Transcript_144361~~S_Transcript_144361.p1 ORF type:5prime_partial len:151 (-),score=21.93 S_Transcript_144361:278-730(-)
TTTTTTTGTTTTTGTTTTTGTTTTTGTTTTGTTTTGTTTTTTTTTTGTTTTTTTTGTTTTTTAATGTTTTTTGGCAGAGTGCCTGTGCTGGAGAAGGCCTCTAAGTCAGTGTGGGAATTAATCTTGGATGATGAGAACGGGCTAGGGAAGGAAATTAGTGAAACTGTCGAAAGAGTGTTTTGTCGATTAAGCGGCCATGAGCCTCAGCCATGTCCTGCTTCAACCAGTGAGACCGAGCAGCAGGTGAAAGAGCGGGACGAGAATCCTAGCTCTGTGTTAAAAAAACGGAACTTCAGTGACATGAATGCAGGAGCAGAGAAAGAGAATAATGCATCTGATGATGTCCCCTCTACTGCAGAGGATAGGAATCCGGCCCCCTCTCCTAGTGTGAAGACATTAAGGCAAGTTTTCCAGCTTTCTCATCCCGTTTGGTGGATTAACAGTTCACTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144361.p1 GENE.S_Transcript_144361~~S_Transcript_144361.p1 ORF type:5prime_partial len:151 (-),score=21.93 S_Transcript_144361:278-730(-)
FFCFCFCFCFVLFFFCFFCFLMFFGRVPVLEKASKSVWELILDDENGLGKEISETVERVFCRLSGHEPQPCPASTSETEQQVKERDENPSSVLKKRNFSDMNAGAEKENNASDDVPSTAEDRNPAPSPSVKTLRQVFQLSHPVWWINSSL*

Click here to download the sequence:
Link to NCBI Protein BLAST