Transcript Information: S_Transcript_144368.p2


Annotated TAIR IDAT1G56420.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12530.1); Has 58 Blast hits to 58 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:21122772-21124234 | Reverse length=183
E-Value6E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6485929968696
Replicate 22.7334429540284
Replicate 30.81605026918587
Condition 2: 8 Hour
Replicate 12.0759229512253
Replicate 22.5737524983756
Replicate 32.2636298341573
Condition 3: 24 Hour
Replicate 11.739857977127
Replicate 20.80225881686185
Replicate 31.5624275295205


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144368.p2 GENE.S_Transcript_144368~~S_Transcript_144368.p2 ORF type:5prime_partial len:113 (-),score=32.95 S_Transcript_144368:73-411(-)
GCACTCAGGCAGGAGCTTGAAGTGCCTGTGCTGGAGAAGGCCTCAAAGTCGGTGTGGGAATTAATTTTGGACGATAATGGATTAGGGAAGGAAGTTAATGAAACTGTTGAGAGAGTTTTTTGCCGATTAAGTGGTCGCGAGCCTCCGCTATTTCCTGCCTCAACCAGTGAGGCCCAGCCAGAGGAGAAAGAGCGGGAGGAGAATCCAAGTTCTGCTTCGAAGAAAAGGACGTTCAGCGACATGAGTAGTGGAGCAGAGAAACTGAACAATGCATCTGATGATGTCCCTTCTACTTTAGAGGATCGAAATCCAGCTCCATCTTCCAACACAAGGGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144368.p2 GENE.S_Transcript_144368~~S_Transcript_144368.p2 ORF type:5prime_partial len:113 (-),score=32.95 S_Transcript_144368:73-411(-)
ALRQELEVPVLEKASKSVWELILDDNGLGKEVNETVERVFCRLSGREPPLFPASTSEAQPEEKEREENPSSASKKRTFSDMSSGAEKLNNASDDVPSTLEDRNPAPSSNTRA*

Click here to download the sequence:
Link to NCBI Protein BLAST