Transcript Information: S_Transcript_144383.p1


Annotated TAIR IDAT3G19210.1
Annotated Gene NameHomolog of RAD54
Annotated Gene Symbol(s)ATRAD54, CHR25, RAD54
Annotation TypeOrtholog
Chromosome Positionchr3:6652799-6658876 | Reverse length=910
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8691684499975
Replicate 22.3057920879691
Replicate 32.5361298244775
Condition 2: 8 Hour
Replicate 13.8944057124797
Replicate 23.6917241979747
Replicate 33.9864621483463
Condition 3: 24 Hour
Replicate 12.2830186266298
Replicate 21.4460957881498
Replicate 32.5804731899624


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144383.p1 GENE.S_Transcript_144383~~S_Transcript_144383.p1 ORF type:complete len:909 (+),score=171.73,SNF2_N|PF00176.19|8.9e-59,Helicase_C|PF00271.27|2.5e-14,ResIII|PF04851.11|8.2e-08,ResIII|PF04851.11|1e+03,DEAD|PF00270.25|2e-05 S_Transcript_144383:488-3214(+)
ATGGAAGACGAAGAAGAAGAACCACTCTCATCTTCTGAAGCTTCCGATTCAAGTGTCGAATTCGTAGCTGAAAGCGACGATGATGGTCTCACAAACGAAGATGACGAAAAATTCAAAGATTATGACGCCATTGACGACGATCTACCCTCCCAAGAAGAAACAAAGTCTCAAAATGTCGCTGCCCTAATCAGGGGAAACCTTGTGGTGAAACGACAATCACTGCTACCACGAGTACTTTCGGTGTCGGATGGAGCAGCAGTGGCTAGAAAACCCTTCAAACCGCCATTTTCGGGAAATAGTAATGAACAGCTTCTTAAACGAAGGCTTGCTGCTCGAAAGAGGTTTGTGCCTTGGGGCTCCACGAGCCCTATGGCGGTTGCTCTACCGAATCCTGTGAAACTCCCAACAGTAACAGTTGTTGAGGAGAAAGATGAGGTGCAGCAGGAGGAATTTACTTTGCCACCTGGCATTGAGCCGTTGGTGTTATGGCAACCTGAAGAAATGGAGGATGGATGTGCTAATTTGACTCCTGTTGTTGTTGATCCCTTGCTTGTTCGCTTCCTTCGACCGCATCAGAGAGAAGGCGTCCAGTTTATGTTTGACTGTGTCTCGGGATTCCATAGTGGTGACAATATCTATGGATGCATTTTGGCTGATGATATGGGTTTAGGGAAGACCCTACAGTCAATCACATTGCTTTATACTCTTCTCTGCCAAGGATTTGACGGAAAACCAATGGTTAAAAAGGCAATTGTAGTTACTCCTACCAGTCTTGTCAGTAATTGGGAGGCAGAAATTAAAAAGTGGGTTGGGGAGAGAGTTCAGCTCATTGCCCTGTGTGAAAGTAGCCGAGATGAAGTTGTTTCTGGAATTGACAGTTTCATAAATCCACGCAGCACAATACAGGTATTGATTGTTTCTTATGAAACATTTCGGATGCATTCTCCAAAGTTCAGCGAAAGTGGATCCTGTGATCTTGTCATATGTGATGAGGCCCACCGGCTTAAAAATGACCAGACAATGACAAACAAGGCATTGGCTTCACTCCTATGCAGGCGTCGCATCTTGCTATCAGGTACACCAATGCAAAATGACCTTGAAGAGTTTTACGCCATGGTTAACTTCACCAATCCTGGTATCCTTGGTGATGCTGCACATTTTCGACGGTATTATGAGACGCCAATCCTCTATGGAAGAGAACCCACAGCCACTGAGGAAGAGAAAATGCTCGGTATTGAACGTTCAGAGGAATTGAGCGCCAAAGTGAATCAGTTTATATTGAGGAGGACCAATGCATTGTTATCTAATCATCTACCACCGAAGATAGTTGAAGTTGTTTGTTGCAAACTAACTCCTCTGCAGTCTGAACTGTACAATCATTTTTTACAGTCAAAAAATGTAAAAAGGGTAATTAATGAAGAAGCAAAACACTCAAAGATATTAGCATATATAACAGCTCTCAAGAAGCTCTGCAATCACCCGAAGCTCATATATGATAGCATAAAGAGCGGAAATTCAGGAATATCAGGCTTTGAGAACTGCATGCGTTTTTTTCCTCCTGAAGTTTTTGCTGGAAGATCTGGTGGATGGACTGGTGGTGATGGCCTTTGGGTGGAGTTATCCGGGAAAATGCATGTATTAGCACGTTTGCTGGCTCAATTTCGTCAAAAAACAGATGATAGAATAGTCCTGGTCTCGAACTACACCCAGACACTTGACCTATTTTCTCAACTTTGTCGTGAGAGAAGATATCCATACTTGAGACTAGATGGGACCACATCAATTAGCAAACGACAAAAGTTGGTCAACCGTTTTAATGATCCTTTAAAGGATGAGTTTGCTTTTCTCTTAAGCAGCAAAGCGGGTGGCTGTGGCCTAAATCTGATTGGTGGAAATCGCCTGGTCTTGTTTGATCCTGACTGGAATCCTGCCAATGATAAACAAGCTGCTGCAAGAGTTTGGAGAGATGGGCAAAAGAAAAGAGTATACATCTACAGATTTCTTAGTACTGGAACCATTGAAGAGAAGGTGTACCAGCGTCAGATGTCAAAAGAAGGGCTCCAGAAAGTTATTCAACAGGAGCAAACCAATTGTGACAAGGGTAACTTTTTCTCAATGGAAGATCTAAGAGATCTTTTCAAATATCGGACCAATGTGAGATCGGAGATCCATGAAAAGATGAGTTGCAGTCGATGTGAAAGCAGCAATACCCGAGAGGGCGAAATGATTGCAGACGCTATCGAAGTCAACAGATTTGAATCAGAAAGTGATGAATCAGGTCAAAGTGATGTTGATATCGGCGGGTTTGCAGAATTTTCTGGGTGCCTAAAGTTAAAAAGCTCAGAGAGACAGGTGGGAACTCCTCTTGAAGAGGATTTGCTCAACTGGGGTCATCATTTCTCTGCCAATTCAGTGCCTGATGTTCTTTTTCAGGCTTCAGCAGGTGATGAGGTTACATTTGTGTTTACGAACCAAATAGGAGGAAAGCTTGTCCCTATTGAATCAATGCGTCCAAAGATGCAAGGTGTAGAGGCTAGTAATGGGAGTCTCATGAGTAACTTGTCAGTAGCCTCCTCTGAACCTGCACAATGTGCACCTCTGAGATCAATAAGAAGTTCATTAAAAGAAGTAACGAATTTATCATGGAGGTCTAAGCTGCCTCTCAGCAGACAGCTACCTCTGAAAAGACCTATTCATTCTATACAAGTTCACGATGAAGCAGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144383.p1 GENE.S_Transcript_144383~~S_Transcript_144383.p1 ORF type:complete len:909 (+),score=171.73,SNF2_N|PF00176.19|8.9e-59,Helicase_C|PF00271.27|2.5e-14,ResIII|PF04851.11|8.2e-08,ResIII|PF04851.11|1e+03,DEAD|PF00270.25|2e-05 S_Transcript_144383:488-3214(+)
MEDEEEEPLSSSEASDSSVEFVAESDDDGLTNEDDEKFKDYDAIDDDLPSQEETKSQNVAALIRGNLVVKRQSLLPRVLSVSDGAAVARKPFKPPFSGNSNEQLLKRRLAARKRFVPWGSTSPMAVALPNPVKLPTVTVVEEKDEVQQEEFTLPPGIEPLVLWQPEEMEDGCANLTPVVVDPLLVRFLRPHQREGVQFMFDCVSGFHSGDNIYGCILADDMGLGKTLQSITLLYTLLCQGFDGKPMVKKAIVVTPTSLVSNWEAEIKKWVGERVQLIALCESSRDEVVSGIDSFINPRSTIQVLIVSYETFRMHSPKFSESGSCDLVICDEAHRLKNDQTMTNKALASLLCRRRILLSGTPMQNDLEEFYAMVNFTNPGILGDAAHFRRYYETPILYGREPTATEEEKMLGIERSEELSAKVNQFILRRTNALLSNHLPPKIVEVVCCKLTPLQSELYNHFLQSKNVKRVINEEAKHSKILAYITALKKLCNHPKLIYDSIKSGNSGISGFENCMRFFPPEVFAGRSGGWTGGDGLWVELSGKMHVLARLLAQFRQKTDDRIVLVSNYTQTLDLFSQLCRERRYPYLRLDGTTSISKRQKLVNRFNDPLKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTNCDKGNFFSMEDLRDLFKYRTNVRSEIHEKMSCSRCESSNTREGEMIADAIEVNRFESESDESGQSDVDIGGFAEFSGCLKLKSSERQVGTPLEEDLLNWGHHFSANSVPDVLFQASAGDEVTFVFTNQIGGKLVPIESMRPKMQGVEASNGSLMSNLSVASSEPAQCAPLRSIRSSLKEVTNLSWRSKLPLSRQLPLKRPIHSIQVHDEAG*

Click here to download the sequence:
Link to NCBI Protein BLAST