Transcript Information: S_Transcript_144472.p1


Annotated TAIR IDAT1G13630.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4669784-4672826 | Reverse length=806
E-Value6.4E-211
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.246971697826
Replicate 21.6050611392027
Replicate 31.3189626298999
Condition 2: 8 Hour
Replicate 12.6032227390828
Replicate 23.4757742646184
Replicate 32.9700256219025
Condition 3: 24 Hour
Replicate 11.8316301817021
Replicate 21.4252211965397
Replicate 30.9951978063671


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144472.p1 GENE.S_Transcript_144472~~S_Transcript_144472.p1 ORF type:complete len:811 (+),score=136.42,PPR_2|PF13041.2|0.00024,PPR_2|PF13041.2|0.00026,PPR_2|PF13041.2|9.3e-11,PPR_2|PF13041.2|3.2e-13,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|6.1e-09,PPR_2|PF13041.2|3.6e-12,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|1.4e-16,PPR_2|PF13041.2|6.4e-17,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|2.8e-13,PPR_2|PF13041.2|8.4e-16,PPR_2|PF13041.2|3.3e-07,PPR_2|PF13041.2|0.8,PPR_1|PF12854.3|6.2e+02,PPR_1|PF12854.3|85,PPR_1|PF12854.3|0.00031,PPR_1|PF12854.3|0.081,PPR_1|PF12854.3|5.2e-09,PPR_1|PF12854.3|0.77,PPR_1|PF12854.3|0.00047,PPR_1|PF12854.3|9.1e-09,PPR_1|PF12854.3|9.7e-08,PPR_1|PF12854.3|4.8,PPR_1|PF12854.3|0.00018,PPR_1|PF12854.3|4.3e-11,PPR_1|PF12854.3|2.9e-09,PPR_1|PF12854.3|6.4e-08,PPR_1|PF12854.3|2.6e-11,PPR_1|PF12854.3|1.6e-07,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|8.3e+02,PPR|PF01535.16|0.28,PPR|PF01535.16|4.2e+03,PPR|PF01535.16|7.9e+03,PPR|PF01535.16|0.22,PPR|PF01535.16|0.0028,PPR|PF01535.16|6.2e-07,PPR|PF01535.16|0.83,PPR|PF01535.16|0.037,PPR|PF01535.16|5.8e-07,PPR|PF01535.16|0.004,PPR|PF01535.16|0.54,PPR|PF01535.16|2.4e-06,PPR|PF01535.16|7.7e-08,PPR|PF01535.16|2.9e-06,PPR|PF01535.16|3.6e-05,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|0.00073,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|6.2e+02,PPR_3|PF13812.2|27,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|3.1e+02,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|0.00037,PPR_3|PF13812.2|4,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|0.051,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|3.9e-05,PPR_3|PF13812.2|4.4e-05,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|4.3e+03,MRP-S27|PF10037.5|90,MRP-S27|PF10037.5|2.6e+03,MRP-S27|PF10037.5|0.072,MRP-S27|PF10037.5|0.57,MRP-S27|PF10037.5|47,MRP-S27|PF10037.5|6.9 S_Transcript_144472:169-2601(+)
ATGCTCAATCGCTTCCACCATTGGAGACCTCATCACTTCCCTCTATCTCTCCTCCCTTTCCCCTTTCGATTGACACCCCTTTTCTCCCCCAAATCCCCTTTCTCTGCTTTTGCCCTAATTTCCGACGAAATCCCTAATCCAAACCCTACTGACTCTGTTCAAGAAATTGTCACTCAATTAAAAAACTTTGGGCCCTATAAATTTGTGGGTAGCCCTTATTTTCAAAGAAATTTAGGGTCCAAATTGGATTTGGGCACTGTTGATCAAATTATTGATAGATTGAGGGTTGAAAACCCGGAATTAGCAGTTGGGTTTTTCTGGGCTTTGAAGGATGAATTTGGGTTTCGGCATTCGAGGGTTTCTGGGTTTGTTGTGGCTCACCTTCTTGCAGGGAAGAAAACGATTAAGCAGGTCCAGGAAGTGTTGAGAGGATTGATTCAAGATGAGGGACCTGGCTCTGTGTCTTCTGTTTGTGAGTTTCTTGAGAAGGCATTCAAGGACTGGGATTCCAACAATGTTGTCTGGGATGTACTGGCTTTTGTTTATTCAAGACATGAGATGCTGCATGAGGCTCTGCTTGTTTTAGCAAAGATGAAGGATCTGAATTTTCAACCATCAATAAACACCTATAATAGTTTGTTGCAAATTTTGAGGTCCACTACTTTTCTATGGGATGTATATGATGAAATAAAAACAAGAGGAATACCACAAAATAATTACACAAATGCCATTCTTATAGATGGTCTCTGCAGGCAGTCAATGCTCCAAGAAGCTGTAGAGTTTTGGCGACAGACTGAATTGAAGGAGAATAGGGCTTCTGTTGTCTCATCGAATACCCTTTTGTCAGCTTTTTGCAGAATGGGCGTCATTAACACTGCAAAGTCTTTCTTTTGCTTGATGTTCAAATGTGGAATTATTGCTAATACTTATAGCTATAATATCCTTATTCATGGATTGTGTGTGGTTGGATCCTTGGAGGAAGCTTTGCAGTTTGTAGATGACATGGAGAAGCATGGAGTTGAATCTGATATTGTGACGTATAATTCTCTTGCAAAAGGGTTTTATCTACTTGGTTTTGTAGGTGGGGTTGAGCAGGTCATCCATACTATGATGCTTAAGGGTCTTGACCCCAATTTTACCACCTATAAGATATTGCGACATGGTTATTGCCAGACAGGCAACACAGAGGAAGTAATTAGAGGGCTGCATGAGATGACTTCTCAGGGTATTCCAATGAATGTTACCTCTTACAGCATCTTACTCAGTTGCTTGTGTAAGGCAGGGCAATTTCAGAAGGCAATCACTTTGCTTGATGAGATGGACTCCATGGGACTAAAAGCAGATTTTTTTGTGTACTCTATTCTTGTACACTCTCTCTGCAAGATAGGGGAAGTGCAAAAGGCCATCCAACTGTGTGATGACATGTATTTAAGAAGAATCATTCCAAGTTCGTGTTCTCAAGGAGCTATTCTATCTGGGCTATGTGCTAAAGGGATGATGGCAGAGGCAAGAATGTATTTTAATGCCTTGGAAAAGGCGGGTTTAGCTGAGGATGTTGTTTTGTACAATATCATGATTAATGGGTACATAAAGATCGGTAAAAATGTAGATGCTGTACAGTTATACAAGAAAATGTTGGAAAAACGGATTAATCCAAGTATAGTCACATTTAATACTTTGATAGATGGGTTCTGCAAAAGTGGAAAACTCTGGGAGGCTAGAAGATGCTTTGAGGAAATTATGATGCATGGACTTCTACCAAATGTGGTAACTTATACCACTCTAATGGATGGGTACTGTAAAGATGGCGATACAAATGCCATGCTTGTGCTACTTCAGGACATGGTGGCAAAAAATGTCTACCCAAGTCATATTACATACACTATTGTTATCAAAGGTCTCTGCCGACAAGGGAGATGGCAAGAATCTTTCCAAGTGCTTGCAAATATGCACGTCAAGGGTTTGAAACCTGATCAGATCACTTACAATACCATTATTCAGTGTCTGTGTGGAGCTGGGAACGTGAAAAGAGCGTTACAGTTGCACAATGAGATGTTACTGCTAAATATTCAACCTACTTCCGTCACTTACAATATCCTTCTTAATGGCCTTTGTATATATGGCGACCTCAATGATGCTGAGATGCTTTTTTGTTTTCTTCAACATCAGCCTATTGCTTTAACGAAAATTGCTTACACCACAATGATAAAAGCACATTGTGTCAAGGGTGATATGCATAAAGCAGTTTTAATTTTCAAATGCATGCTGCATAATGGTTTTGAGGTCAACATCAAGGATTTTAGTGCCATCATTAGTAGATTGTGTGGAAGGGCTTTCCTTGCCGAAGCAAAACTTTTCCTCGGTATAATGTTGTCAAAAGGCATTTCACCTGACAAGGAACTTTATGGAATGCTTGAAAAGGCCTTCTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144472.p1 GENE.S_Transcript_144472~~S_Transcript_144472.p1 ORF type:complete len:811 (+),score=136.42,PPR_2|PF13041.2|0.00024,PPR_2|PF13041.2|0.00026,PPR_2|PF13041.2|9.3e-11,PPR_2|PF13041.2|3.2e-13,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|6.1e-09,PPR_2|PF13041.2|3.6e-12,PPR_2|PF13041.2|2.2e-06,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|1.4e-16,PPR_2|PF13041.2|6.4e-17,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|2.8e-13,PPR_2|PF13041.2|8.4e-16,PPR_2|PF13041.2|3.3e-07,PPR_2|PF13041.2|0.8,PPR_1|PF12854.3|6.2e+02,PPR_1|PF12854.3|85,PPR_1|PF12854.3|0.00031,PPR_1|PF12854.3|0.081,PPR_1|PF12854.3|5.2e-09,PPR_1|PF12854.3|0.77,PPR_1|PF12854.3|0.00047,PPR_1|PF12854.3|9.1e-09,PPR_1|PF12854.3|9.7e-08,PPR_1|PF12854.3|4.8,PPR_1|PF12854.3|0.00018,PPR_1|PF12854.3|4.3e-11,PPR_1|PF12854.3|2.9e-09,PPR_1|PF12854.3|6.4e-08,PPR_1|PF12854.3|2.6e-11,PPR_1|PF12854.3|1.6e-07,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|8.3e+02,PPR|PF01535.16|0.28,PPR|PF01535.16|4.2e+03,PPR|PF01535.16|7.9e+03,PPR|PF01535.16|0.22,PPR|PF01535.16|0.0028,PPR|PF01535.16|6.2e-07,PPR|PF01535.16|0.83,PPR|PF01535.16|0.037,PPR|PF01535.16|5.8e-07,PPR|PF01535.16|0.004,PPR|PF01535.16|0.54,PPR|PF01535.16|2.4e-06,PPR|PF01535.16|7.7e-08,PPR|PF01535.16|2.9e-06,PPR|PF01535.16|3.6e-05,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|0.00073,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|6.2e+02,PPR_3|PF13812.2|27,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|3.1e+02,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|0.00037,PPR_3|PF13812.2|4,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|0.051,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|0.0001,PPR_3|PF13812.2|3.9e-05,PPR_3|PF13812.2|4.4e-05,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|4.3e+03,MRP-S27|PF10037.5|90,MRP-S27|PF10037.5|2.6e+03,MRP-S27|PF10037.5|0.072,MRP-S27|PF10037.5|0.57,MRP-S27|PF10037.5|47,MRP-S27|PF10037.5|6.9 S_Transcript_144472:169-2601(+)
MLNRFHHWRPHHFPLSLLPFPFRLTPLFSPKSPFSAFALISDEIPNPNPTDSVQEIVTQLKNFGPYKFVGSPYFQRNLGSKLDLGTVDQIIDRLRVENPELAVGFFWALKDEFGFRHSRVSGFVVAHLLAGKKTIKQVQEVLRGLIQDEGPGSVSSVCEFLEKAFKDWDSNNVVWDVLAFVYSRHEMLHEALLVLAKMKDLNFQPSINTYNSLLQILRSTTFLWDVYDEIKTRGIPQNNYTNAILIDGLCRQSMLQEAVEFWRQTELKENRASVVSSNTLLSAFCRMGVINTAKSFFCLMFKCGIIANTYSYNILIHGLCVVGSLEEALQFVDDMEKHGVESDIVTYNSLAKGFYLLGFVGGVEQVIHTMMLKGLDPNFTTYKILRHGYCQTGNTEEVIRGLHEMTSQGIPMNVTSYSILLSCLCKAGQFQKAITLLDEMDSMGLKADFFVYSILVHSLCKIGEVQKAIQLCDDMYLRRIIPSSCSQGAILSGLCAKGMMAEARMYFNALEKAGLAEDVVLYNIMINGYIKIGKNVDAVQLYKKMLEKRINPSIVTFNTLIDGFCKSGKLWEARRCFEEIMMHGLLPNVVTYTTLMDGYCKDGDTNAMLVLLQDMVAKNVYPSHITYTIVIKGLCRQGRWQESFQVLANMHVKGLKPDQITYNTIIQCLCGAGNVKRALQLHNEMLLLNIQPTSVTYNILLNGLCIYGDLNDAEMLFCFLQHQPIALTKIAYTTMIKAHCVKGDMHKAVLIFKCMLHNGFEVNIKDFSAIISRLCGRAFLAEAKLFLGIMLSKGISPDKELYGMLEKAFF*

Click here to download the sequence:
Link to NCBI Protein BLAST