Transcript Information: S_Transcript_144519.p1


Annotated TAIR IDAT4G17616.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9819608-9821632 | Forward length=674
E-Value4.9E-174
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0038372795952
Replicate 25.7154301639244
Replicate 35.2656837007495
Condition 2: 8 Hour
Replicate 16.534242158453
Replicate 26.4498226579713
Replicate 35.4328692363671
Condition 3: 24 Hour
Replicate 16.2066242786646
Replicate 24.7663447744129
Replicate 36.1474342213027


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144519.p1 GENE.S_Transcript_144519~~S_Transcript_144519.p1 ORF type:complete len:718 (+),score=132.85,PPR_2|PF13041.2|3.5e+02,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|0.031,PPR_2|PF13041.2|0.15,PPR_2|PF13041.2|0.00035,PPR_2|PF13041.2|12,PPR_3|PF13812.2|3.5e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|7.3e+03,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|0.72,PPR_3|PF13812.2|3.5e+03,PPR_3|PF13812.2|3.4e+03,PPR_3|PF13812.2|0.031,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|21,PPR|PF01535.16|0.13,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|6.5e+02,PPR|PF01535.16|13 S_Transcript_144519:441-2594(+)
ATGGCATTATCTCCTGTAAACGAGATCAAAATGTATCGTCAGCCTATTGAGTTCTTTGGATTGCATTTACATGCCATTTCAAGTATGAAGATGTCTGCCTCAGGAGTGGTCAATGACAGAAAATGCTTGCTAAAATACTGTGTACGCATTTACCAGGAATCCAATTTATGGTGGGACAATTTGAGGGTTCCATATCTCAAACTGTACTCAACTACTATTCAACCTCAAGATGAAGGTTTTGACCAAAATATTCTGTTGACAAAGCTTGAAAGTGCATTGAGGGAATCTAAACATGAAGCAGCATGGCGTAGTTTCAATGAGTTTAAAAGCTTGCATGGCTTTCCTGCTCCATCTCTTGTGAGTAAGCTGATCACTGTACTTTCATATTCATCTGATCAGCGATCACTACACAAAGCATGTAATATAATTTTTGAAACTGCAAAAGAGAGGCCAGAATTGCTTCAACATGATACACTGTCTAGGCTTTCCCTTATGCTGGGAAGAGCTCAGATGCTTGTACCTGCATCAAAAATAATTAGACTGATGCTGCAGAAAAACAGTGCTCCTGCAATGGATGTCCTGTCTTCTGTGTTTATGCATATGGTGAAGACTGAGGTGGGGACTAATCTGGCATCCAATATGCTGCTTGAGATTTGTGATTGTTTCCATTGCCTTAGTGAAAAGAAATCTGAATGCGCCATGTCTATGAAACCTAACACCACAGTCTTCAATCTGATTCTTGATGCTTGTGTGAGATTTCAATCATCATTGAAAGGGCAACAGATAATAGAGGTCATGGCACGGACTGGAGTGGTAGTTGACGCATACTCTGTTGTTCTGTTTGCTAAGATTTATGAGATGAATGGCCAAAGGGATGAGTTAAAGAAGTTTAAAGAGTATGTAGATCGAGTTTCAATTCCTCTTGCTCAGCATTACAGTCAGTTCTATGATAAGTTATTGAGCTTGCATTATAGGTTTGACGATCTTTATGCTGCTGCCACTCTTGTAACGGATATGTATTTCCTCTGGGGTTCTCGTCCCCTGCAGGGAAATAAGGACTTGAAAAATCCTTGTCCAGTACCAATTGGTTCCCCTTATTTGAAAAAAGATTTGAAAGCTCAAGTTATGTTTGAGCTGTTGCAAAAGGATTCTCTCTTCCATGTCAAAGGTAGAGATGACTTTGTACTAGTTAAAAATGGGAAACTTGTCCTTAGCTGTAAAGGATGGGCACAACTCATCATAAGATACAAGAGAAGTGGAAAGATTGCTGAATTGTCAAAAATTTTAGCTGTAATTGAAAAGGAGATGGATACATATGAAGAAGGCAGTTTTTGCAGTGATGTCATTGACGCATGCATCTATACTGGCTGGCTAGAGACTGCTCATGATATTGTGGATGATATGGAGATGGTCAACGTTCCTGTTCCTACCAAAACGTACATGTTACTCTTGAAGGCTTACTGCAGAAATAATATGTCCAAGGAAGTTCAAGCACTGGCAAAGCAAATTAAACGGGTTGGCTTGCCCTTAGATCCAAGTGATGAGATTATTGTTTCTGAATGTCTTTCAGGTGTAGCACATGGAAGTGGTCCGAGTCTGCTTGCACCAGTTACCGATCGGCAATCAGAATTAATGGACTGTCTGGTTCTAGAAACGAAAAAGGAAGATAAAGATCCGTCGAAGGTTATTCTTGAAATAAATTCTTCAATATATTTCTTTTGCCAGGCCAAAATGATGGAAGATGCACAGCAGGCATACAGGAAAGTGCAGGTGTTAAATGTCCAACCCACAGTGCAGACTTTTGCCTACCTGATACAGGGTTACTCTTCTTTAAAAATGTATCGGCAAATCACCATCCTATGGGGTGACATCAAAAGGTACATGGACCATGGGTGTGAGCTTGTAAACAGGGATTTGTATGAGTCATTGCTCCTGAATTTTCTTCGGGGAGGGTACTTTGAGAGGGTAATGGAGGTTATTAGCCGTATGAAGGAGCAGAGCATGTATATGGATAGATGGTTGTACAAGAATGAGTTTGTCAGAATCCATAAGAATCTTTACAGGAGAATGAAGGCAGGAGATGCTAGAAATGAAGCACAGAGATTGAGGCTTGAGCATGTTAGTGCCTTCAGGAGGTGGGTTCGCAATAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144519.p1 GENE.S_Transcript_144519~~S_Transcript_144519.p1 ORF type:complete len:718 (+),score=132.85,PPR_2|PF13041.2|3.5e+02,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|0.031,PPR_2|PF13041.2|0.15,PPR_2|PF13041.2|0.00035,PPR_2|PF13041.2|12,PPR_3|PF13812.2|3.5e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|7.3e+03,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|0.72,PPR_3|PF13812.2|3.5e+03,PPR_3|PF13812.2|3.4e+03,PPR_3|PF13812.2|0.031,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|21,PPR|PF01535.16|0.13,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|6.5e+02,PPR|PF01535.16|13 S_Transcript_144519:441-2594(+)
MALSPVNEIKMYRQPIEFFGLHLHAISSMKMSASGVVNDRKCLLKYCVRIYQESNLWWDNLRVPYLKLYSTTIQPQDEGFDQNILLTKLESALRESKHEAAWRSFNEFKSLHGFPAPSLVSKLITVLSYSSDQRSLHKACNIIFETAKERPELLQHDTLSRLSLMLGRAQMLVPASKIIRLMLQKNSAPAMDVLSSVFMHMVKTEVGTNLASNMLLEICDCFHCLSEKKSECAMSMKPNTTVFNLILDACVRFQSSLKGQQIIEVMARTGVVVDAYSVVLFAKIYEMNGQRDELKKFKEYVDRVSIPLAQHYSQFYDKLLSLHYRFDDLYAAATLVTDMYFLWGSRPLQGNKDLKNPCPVPIGSPYLKKDLKAQVMFELLQKDSLFHVKGRDDFVLVKNGKLVLSCKGWAQLIIRYKRSGKIAELSKILAVIEKEMDTYEEGSFCSDVIDACIYTGWLETAHDIVDDMEMVNVPVPTKTYMLLLKAYCRNNMSKEVQALAKQIKRVGLPLDPSDEIIVSECLSGVAHGSGPSLLAPVTDRQSELMDCLVLETKKEDKDPSKVILEINSSIYFFCQAKMMEDAQQAYRKVQVLNVQPTVQTFAYLIQGYSSLKMYRQITILWGDIKRYMDHGCELVNRDLYESLLLNFLRGGYFERVMEVISRMKEQSMYMDRWLYKNEFVRIHKNLYRRMKAGDARNEAQRLRLEHVSAFRRWVRNR*

Click here to download the sequence:
Link to NCBI Protein BLAST