Transcript Information: S_Transcript_144560.p1


Annotated TAIR IDAT1G05670.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1698574-1700799 | Reverse length=741
E-Value4.2E-305
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0498726051002
Replicate 22.5197873863828
Replicate 33.1595125561547
Condition 2: 8 Hour
Replicate 13.058621718792
Replicate 23.3275525201187
Replicate 32.4910950720297
Condition 3: 24 Hour
Replicate 12.843026005416
Replicate 22.2573517506322
Replicate 32.2441925300701


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144560.p1 GENE.S_Transcript_144560~~S_Transcript_144560.p1 ORF type:complete len:753 (+),score=133.15,PPR_2|PF13041.2|2.1,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|1e-13,PPR_2|PF13041.2|3.6e-10,PPR_2|PF13041.2|1.8e-14,PPR_2|PF13041.2|8.1e-15,PPR_2|PF13041.2|4.4e-18,PPR_2|PF13041.2|2.6e-16,PPR_2|PF13041.2|6.8e-18,PPR_2|PF13041.2|8.9e-18,PPR_2|PF13041.2|1.9e-18,PPR_2|PF13041.2|1.3e-15,PPR_2|PF13041.2|8.6e-12,PPR_2|PF13041.2|0.00058,PPR_2|PF13041.2|7.1e-05,PPR_1|PF12854.3|2.2e+03,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|2.5e-08,PPR_1|PF12854.3|5.9e-10,PPR_1|PF12854.3|1.1e-11,PPR_1|PF12854.3|2.9e-09,PPR_1|PF12854.3|4.8e-10,PPR_1|PF12854.3|1e-11,PPR_1|PF12854.3|6.1e-13,PPR_1|PF12854.3|5.7e-11,PPR_1|PF12854.3|3.6e-09,PPR_1|PF12854.3|7.3e-05,PPR_1|PF12854.3|0.0005,PPR_1|PF12854.3|42,PPR|PF01535.16|8.5,PPR|PF01535.16|2.1e+02,PPR|PF01535.16|7.5e-05,PPR|PF01535.16|0.002,PPR|PF01535.16|7.5e-06,PPR|PF01535.16|4.5e-07,PPR|PF01535.16|3.2e-08,PPR|PF01535.16|4.9e-08,PPR|PF01535.16|8.1e-07,PPR|PF01535.16|6.8e-07,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|7.3e-05,PPR|PF01535.16|0.026,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|5.6e-05,PPR|PF01535.16|1.5e+03,PPR_3|PF13812.2|8e+03,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.62,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.00011,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|6.3e-05,PPR_3|PF13812.2|7.7e-08,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|7.1,PPR_3|PF13812.2|1.7,DUF3368|PF11848.4|33,DUF3368|PF11848.4|9.9e+02,DUF3368|PF11848.4|2.7e+03,DUF3368|PF11848.4|1e+03,DUF3368|PF11848.4|1.5e+03,DUF3368|PF11848.4|6.7e+02,DUF3368|PF11848.4|1.7e+02,DUF3368|PF11848.4|0.24 S_Transcript_144560:382-2640(+)
ATGGAAATGAAGAGGGGTGCAATCTCCTTGTCCAGTTGCTGTTCAAGGCTGGTGAGTTGGAGTCCACACTTGGGTCGTTTTATGTGTGTGTTATTCAAGGAAAGGACTTTGAGTGAAAAGTTATGCACTTTCTACTCGACTAGTACACGGCCATTTCCAGATTACTCGCCTCGAAAACCAAGTATCAAAGACTCTGAACTTGCTCATTACATTTCAAACGCTCTTAAGCAACGCCGTTCAGAGAAATCAGGGCTTGTTCTGAGACCTTTTGTGTCAAAGTTCAGGTCTGACCATGCCATTTGGGTGTTGATGAACATCAGGCATGATTACAAACTGGTTTTGGACTTTTACAAGTGGGCTTGCTTGCATAGAGAATTATCGTTGGAAGTACGGAGTATTGTCATTCATCTAGCTGTTGCTTCCAAAGATTCAAAGATGGCTCGTGATCTTATGTATGATTTTTGGGAAAAGCCCAATCTGGATATCAACTATTCTTTTTCTTGTTTTGTTGAAAGTTTGATCTACACTTACAAGGAATGGGGTTCAGATCGCCGTGTTTTTGATCTATTTTTTGAGGTCCTCGTTGAAATTGGTCTCCTTATAGAGGCAAGGAGATATTTTGAAAAGATGTTGAATTATGGTTTGGTGATCTCCGCTGACTCCTGCAGTATGCTTCTTTCTCGTCTTGCAAGTCACTTGGATGCGCAAAAGGAGGCGTTTGAGGTTTTTTGTGAGTTCCTTGAAGCAGGAGTTTGTTGGGATACAGAAGCCTATAATATAATAATCCATATTCTTTGTCGGTTAGGGAAAATAAAAGAAGCCCACCATTTGATATTGCAAATGGAGTTAAGAGGCTGTATGCCTGATGTTGTAAGTTTTAGTACAGTTATTAATGGATATTGTAATGTTGGTGGACTAGAAAGGGTGCTGAGGCTTGTTCATGTAATGGAGTTGAAGGGGTTGAAGCTGAATGTATTTACTTACAACAGCATTATTTTTCTTATGTGTAAATCTGGTAAAGTATCTGAAGCAGAAATAGTTTTGAGGGAAATGATTAGTCGGAGAACACTGCCAGACAATGTTGTCTACACAACTATCATTGATGGTTTCTGTAAGTCAGGTAATGTCACAGTGGCTATCAAGCTTCTTGAGGAAATGCAAAGTCTTAAAGTGTTCCCTGATTGTATCACATATACTGCTATTATATGTGGGCTCTGTCAATGCGGAAACATGGTAGAAGCAGACAAGCTTTTCCACCAAATGCTTGACAGAGGAGTAGCACCAGATGAAATTACATTTACAACACTCATAGATGGTTGCTGCAAGGTAGGTAAGCTGAAAGAGGCTTTCTTTTGGCACAATAAGATGGTCAAGATGGGTTTGACCCCAAATGTTGTCACCTATACTGCGCTTGCTGACGGCCTTTGTAAACAAGGTGAGGTTGAAACAGCCAACGAGCTTTTGCATGAAATGTCTTCCAAGGGACTAGAACTTAATGTGTGCACATACAATGTGCTACTTAATGGTCTCTGTAAAGCCGGGAATATAAAGCAGGCGATGAAATTGATGGAGGACATGGAGGTGACAGGATTTGATCCTGACACCATTACTTATACTACTCTGATGGATGCTTATTGCAAGTCAGGGGAGATGTCTGCAGCCCATGAGCTCCTGAGGAGAATGCTGGATCGAGGACTTCAACCCACTGTTGTTACATTTAATGTGTTGATGAATGGCTTCTGCATGTCAGGGAAGTTGGATGATGGTGACAGGCTTCTGAAATGGATGCTAGAGAAGGGCGTTATGCCAAATGTCACGACTTACAATACTCTTATGAAGCAGTACTGCATCAGAAACAACATGCGTGTCACAACTGAAATTTACAGGGAGATGTGTGCTCGAAATGTGAAGCCGGACAGAAACACGTATAATATACTGATTATGGGGCATACTAAAGCAAGAAATATGATAGAAGCATGGTATTTACACAAAGAAATGGCTGCAAAAGGCTTCGATCTCCCTGCCACTTCCTGTAATATTTTTATCAAGGGGCTTCTGAAAAGGAGAAAGTATGTGGAGGCGAAGGAGCACTTTGATGAGATGAGGAGAAAAGGCTTTATTGCAGATCAAGAAATATACAGCTTTTTTCTAGATAAAAACTTTGATGAAGGGAACATGGGAATGGCTCTTGATCTTTGTGATGAAACAATAGAGAGATTCCTTGCAGATAAGGTTTATGAAGGGAACAACCCTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144560.p1 GENE.S_Transcript_144560~~S_Transcript_144560.p1 ORF type:complete len:753 (+),score=133.15,PPR_2|PF13041.2|2.1,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|1e-13,PPR_2|PF13041.2|3.6e-10,PPR_2|PF13041.2|1.8e-14,PPR_2|PF13041.2|8.1e-15,PPR_2|PF13041.2|4.4e-18,PPR_2|PF13041.2|2.6e-16,PPR_2|PF13041.2|6.8e-18,PPR_2|PF13041.2|8.9e-18,PPR_2|PF13041.2|1.9e-18,PPR_2|PF13041.2|1.3e-15,PPR_2|PF13041.2|8.6e-12,PPR_2|PF13041.2|0.00058,PPR_2|PF13041.2|7.1e-05,PPR_1|PF12854.3|2.2e+03,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|2.5e-08,PPR_1|PF12854.3|5.9e-10,PPR_1|PF12854.3|1.1e-11,PPR_1|PF12854.3|2.9e-09,PPR_1|PF12854.3|4.8e-10,PPR_1|PF12854.3|1e-11,PPR_1|PF12854.3|6.1e-13,PPR_1|PF12854.3|5.7e-11,PPR_1|PF12854.3|3.6e-09,PPR_1|PF12854.3|7.3e-05,PPR_1|PF12854.3|0.0005,PPR_1|PF12854.3|42,PPR|PF01535.16|8.5,PPR|PF01535.16|2.1e+02,PPR|PF01535.16|7.5e-05,PPR|PF01535.16|0.002,PPR|PF01535.16|7.5e-06,PPR|PF01535.16|4.5e-07,PPR|PF01535.16|3.2e-08,PPR|PF01535.16|4.9e-08,PPR|PF01535.16|8.1e-07,PPR|PF01535.16|6.8e-07,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|7.3e-05,PPR|PF01535.16|0.026,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|5.6e-05,PPR|PF01535.16|1.5e+03,PPR_3|PF13812.2|8e+03,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.62,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|0.00011,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|6.3e-05,PPR_3|PF13812.2|7.7e-08,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|7.1,PPR_3|PF13812.2|1.7,DUF3368|PF11848.4|33,DUF3368|PF11848.4|9.9e+02,DUF3368|PF11848.4|2.7e+03,DUF3368|PF11848.4|1e+03,DUF3368|PF11848.4|1.5e+03,DUF3368|PF11848.4|6.7e+02,DUF3368|PF11848.4|1.7e+02,DUF3368|PF11848.4|0.24 S_Transcript_144560:382-2640(+)
MEMKRGAISLSSCCSRLVSWSPHLGRFMCVLFKERTLSEKLCTFYSTSTRPFPDYSPRKPSIKDSELAHYISNALKQRRSEKSGLVLRPFVSKFRSDHAIWVLMNIRHDYKLVLDFYKWACLHRELSLEVRSIVIHLAVASKDSKMARDLMYDFWEKPNLDINYSFSCFVESLIYTYKEWGSDRRVFDLFFEVLVEIGLLIEARRYFEKMLNYGLVISADSCSMLLSRLASHLDAQKEAFEVFCEFLEAGVCWDTEAYNIIIHILCRLGKIKEAHHLILQMELRGCMPDVVSFSTVINGYCNVGGLERVLRLVHVMELKGLKLNVFTYNSIIFLMCKSGKVSEAEIVLREMISRRTLPDNVVYTTIIDGFCKSGNVTVAIKLLEEMQSLKVFPDCITYTAIICGLCQCGNMVEADKLFHQMLDRGVAPDEITFTTLIDGCCKVGKLKEAFFWHNKMVKMGLTPNVVTYTALADGLCKQGEVETANELLHEMSSKGLELNVCTYNVLLNGLCKAGNIKQAMKLMEDMEVTGFDPDTITYTTLMDAYCKSGEMSAAHELLRRMLDRGLQPTVVTFNVLMNGFCMSGKLDDGDRLLKWMLEKGVMPNVTTYNTLMKQYCIRNNMRVTTEIYREMCARNVKPDRNTYNILIMGHTKARNMIEAWYLHKEMAAKGFDLPATSCNIFIKGLLKRRKYVEAKEHFDEMRRKGFIADQEIYSFFLDKNFDEGNMGMALDLCDETIERFLADKVYEGNNPG*

Click here to download the sequence:
Link to NCBI Protein BLAST