Transcript Information: S_Transcript_144786.p1


Annotated TAIR IDAT5G25580.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: DDT domain superfamily (TAIR:AT1G18950.1); Has 178 Blast hits to 178 proteins in 75 species: Archae - 0; Bacteria - 4; Metazoa - 51; Fungi - 33; Plants - 60; Viruses - 1; Other Eukaryotes - 29 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8903550-8906108 | Forward length=405
E-Value9.9E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9451007403117
Replicate 21.5981095051721
Replicate 31.5214329565948
Condition 2: 8 Hour
Replicate 12.7032184909042
Replicate 22.3857303378381
Replicate 33.4311223509024
Condition 3: 24 Hour
Replicate 11.3625581251679
Replicate 21.4592393771491
Replicate 31.4717088284675


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144786.p1 GENE.S_Transcript_144786~~S_Transcript_144786.p1 ORF type:complete len:497 (+),score=119.40 S_Transcript_144786:187-1677(+)
ATGGCGGAAAACGGAGGAACAAGCGAACTCGAAGAATCTCGGCTCAAGCTTCGTCAACGATGGGAGCTTGCTTCCGTTCTGAATTTCTTAACCGTGTTTGAGCCGGTGGTAGCGAAGGACCTGAAAATGTCAGCAGAGGAGATCGAGAATGGTTTGATAAGCCCAAATGCTTCACTTGCTAAGCTTCATGTTACTCTTCTTAAGGGAATACCACCTGTTAATAAGAACTTGTCCAATCCTGATGTATGGGTGACAATTCTTTGTAGAAAGCTTTCTGATTGGTGGCCTTGGGTTGCTGAAGGCAAAATTCCTTTAACTGTAGCAAAAGGAGAAGAAATATCCAGATACAAAGAACTTGATCCAGTTATTCGTTTGATGATGTTAAAAGCATTGTGTGAAGTCCGAACCGAGCAAGATGATCTAGTATCTTATATCAATGATGCGCTGAAGGAAGGAAAAGAGCTTTCTCATTTTCGAAAAGATAAGATCGCTGAAGATGGGACTGGGACTTCTTACTGGTATGATGGAAATTCTGTTATTGGTCATAGACTGTACAGGGAAGTTACGAAGACTAAAGTGAAGCCGAAGCAGAATGGCAGAGGCTACTTAGATCGACCACTGAGTGTAAAGTGGGAGACTCTTGCAACAAACCTTGGGGAATTCCGTGAAGTTATGGAGCAGTTGTCTTCTGCTAAAAAAGGAGTTGAGTCAAAAGTGTATAAGTTTATCGAATCTGAAGCCGTTCCTGTACTTGAGCAACTGGAAAAGAAGAAAGAGAGGGCTTTGAAACGACAGCAAAGGCAGGAGGCTCTTCTTAATAATTACCAACCTTATGCAGCTGGAGTCACCCGTTCTTGTCGCACCAGGAGGCCTGTTAGCTACACGTTTGCTGACTTTGACCGGACTATTGATGAGGCCATAAAACAAACAAGGAAAAGGAAAGATCGAAAAGAGGAAAGGTATGATGCAAAGCGTAATGAACGAGGAAAAAGGGACAATGGTGCCTCAGATGGAGACTCAGTAAAGGCTGCTCACTCTGATGAAGGATCTTTATCTTCTATGAACGAGGATGTGGAACATGAACAGGATGAAGACATTAAAGATGATGAGGATGACAACTATAGTGAAAGGTTTGGCAAGAATGAAGACTGTAAAAGTGTTGTTAACCAGTCAAGTGATGATAGTGACCTCGACAATGGCAAAGCTGGAAGGGACAACCATGTAAAACTACACTCTGATGAGTATGATCATGATGCTGCTGGATTACACACGAAAAACAGTCCAGGGCGTGCTTCTGGTCGTCATCTTCAAGAAAACAGAAACCTGGGAGCAAAGAACCGACTGAGGCAAAGACCTACTCGAAACACAGCCATTGATTCTGTTGTCCCTGATTCTGACATTGGAAGCTCGTCTGAGAATCAGAGCTCTAGTGGACCGGGAATGGGAGACCCATCTCTGGTTTCTAATTCCGAGGATGAAATTGGCAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144786.p1 GENE.S_Transcript_144786~~S_Transcript_144786.p1 ORF type:complete len:497 (+),score=119.40 S_Transcript_144786:187-1677(+)
MAENGGTSELEESRLKLRQRWELASVLNFLTVFEPVVAKDLKMSAEEIENGLISPNASLAKLHVTLLKGIPPVNKNLSNPDVWVTILCRKLSDWWPWVAEGKIPLTVAKGEEISRYKELDPVIRLMMLKALCEVRTEQDDLVSYINDALKEGKELSHFRKDKIAEDGTGTSYWYDGNSVIGHRLYREVTKTKVKPKQNGRGYLDRPLSVKWETLATNLGEFREVMEQLSSAKKGVESKVYKFIESEAVPVLEQLEKKKERALKRQQRQEALLNNYQPYAAGVTRSCRTRRPVSYTFADFDRTIDEAIKQTRKRKDRKEERYDAKRNERGKRDNGASDGDSVKAAHSDEGSLSSMNEDVEHEQDEDIKDDEDDNYSERFGKNEDCKSVVNQSSDDSDLDNGKAGRDNHVKLHSDEYDHDAAGLHTKNSPGRASGRHLQENRNLGAKNRLRQRPTRNTAIDSVVPDSDIGSSSENQSSSGPGMGDPSLVSNSEDEIGS*

Click here to download the sequence:
Link to NCBI Protein BLAST