Transcript Information: S_Transcript_144789.p1


Annotated TAIR IDAT5G25580.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: DDT domain superfamily (TAIR:AT1G18950.1); Has 178 Blast hits to 178 proteins in 75 species: Archae - 0; Bacteria - 4; Metazoa - 51; Fungi - 33; Plants - 60; Viruses - 1; Other Eukaryotes - 29 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8903550-8906108 | Forward length=405
E-Value2E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.66856938053075
Replicate 30.37258052694143
Condition 2: 8 Hour
Replicate 10.64622394900403
Replicate 21.2428804799848
Replicate 31.5071811437866
Condition 3: 24 Hour
Replicate 10.22065538879388
Replicate 20
Replicate 30.38215218795631


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144789.p1 GENE.S_Transcript_144789~~S_Transcript_144789.p1 ORF type:complete len:396 (+),score=97.42 S_Transcript_144789:69-1256(+)
ATGTCATCACTAAGGTCCTGCCGATTGTTGTGCAGAGAAGAAATATCCAGATACAAAGAACTTGATCCAGTTATTCGTTTGATGATGTTAAAAGCATTGTGTGAAGTCCGAACCGAGCAAGATGATCTAGTATCTTATATCAATGATGCGCTGAAGGAAGGAAAAGAGCTTTCTCATTTTCGAAAAGATAAGATCGCTGAAGATGGGACTGGGACTTCTTACTGGTATGATGGAAATTCTGTTATTGGTCATAGACTGTACAGGGAAGTTACGAAGACTAAAGTGAAGCCGAAGCAGAATGGCAGAGGCTACTTAGATCGACCACTGAGTGTAAAGTGGGAGACTCTTGCAACAAACCTTGGGGAATTCCGTGAAGTTATGGAGCAGTTGTCTTCTGCTAAAAAAGGAGTTGAGTCAAAAGTGTATAAGTTTATCGAATCTGAAGCCGTTCCTGTACTTGAGCAACTGGAAAAGAAGAAAGAGAGGGCTTTGAAACGACAGCAAAGGCAGGAGGCTCTTCTTAATAATTACCAACCTTATGCAGCTGGAGTCACCCGTTCTTGTCGCACCAGGAGGCCTGTTAGCTACACGTTTGCTGACTTTGACCGGACTATTGATGAGGCCATAAAACAAACAAGGAAAAGGAAAGATCGAAAAGAGGAAAGGTATGATGCAAAGCGTAATGAACAAGGAAAAAGGGACAATGGAGACTCAGCAAAGGCTGCTCACTCTGATGAAGGATCTCTATCTTCTATGAACGAGGATGTGAAGCATGAACAGGGTGAAGCCATTAAAGATGACGAGGATGACAACTATAGTGAAAGGTCTGACAAGAATGAAGACTGTAAAAGTGATGTTAACGAGTCAAGTGATGATAGTGACCTCGACAATGGCAAAGCTGGAAGGGACAATCATGTAATACTACACTCTGATGAGGAGAATGATCATGATGCTGCTGGATTGCACATGAAAAACAGTCCAATGCGTGCTTCTGGTCGTCACCTTCAAGAAACCAGAAACCTGGGAGCAAAGAACCGACTGAGGCAAAGACCTACTCGAAACACAGCCATTGATTCTGTTGTCCCTGATTCTGACATTGGAAGCTCGTCTGAGAATCAGAGCTCTAGTGGACCGGGAATGGGAGACCCATCTCTGGTTTCTAATTCCGAGGATGAAATTGGCAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144789.p1 GENE.S_Transcript_144789~~S_Transcript_144789.p1 ORF type:complete len:396 (+),score=97.42 S_Transcript_144789:69-1256(+)
MSSLRSCRLLCREEISRYKELDPVIRLMMLKALCEVRTEQDDLVSYINDALKEGKELSHFRKDKIAEDGTGTSYWYDGNSVIGHRLYREVTKTKVKPKQNGRGYLDRPLSVKWETLATNLGEFREVMEQLSSAKKGVESKVYKFIESEAVPVLEQLEKKKERALKRQQRQEALLNNYQPYAAGVTRSCRTRRPVSYTFADFDRTIDEAIKQTRKRKDRKEERYDAKRNEQGKRDNGDSAKAAHSDEGSLSSMNEDVKHEQGEAIKDDEDDNYSERSDKNEDCKSDVNESSDDSDLDNGKAGRDNHVILHSDEENDHDAAGLHMKNSPMRASGRHLQETRNLGAKNRLRQRPTRNTAIDSVVPDSDIGSSSENQSSSGPGMGDPSLVSNSEDEIGS*

Click here to download the sequence:
Link to NCBI Protein BLAST