Transcript Information: S_Transcript_144794.p1


Annotated TAIR IDAT5G25580.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: DDT domain superfamily (TAIR:AT1G18950.1); Has 178 Blast hits to 178 proteins in 75 species: Archae - 0; Bacteria - 4; Metazoa - 51; Fungi - 33; Plants - 60; Viruses - 1; Other Eukaryotes - 29 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8903550-8906108 | Forward length=405
E-Value0.0008
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8228083037795
Replicate 20.50371665656427
Replicate 30.92634747451875
Condition 2: 8 Hour
Replicate 10.48688105746879
Replicate 21.1237001599863
Replicate 30.97332637465668
Condition 3: 24 Hour
Replicate 10.89773493796962
Replicate 20.31046317227873
Replicate 30.34550745760433


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144794.p1 GENE.S_Transcript_144794~~S_Transcript_144794.p1 ORF type:complete len:219 (+),score=58.17 S_Transcript_144794:777-1433(+)
ATGTTTCTATATCTTATATGTACTATAATTGAGTATTCTCTCTCGTTCATTAATCTATTTGCAGCTGACTTTGACCGGACTATTGATGAGGCCATAAAACAAACAAGGAAAAGGAAAGATCGAAAAGAGGAAAGGTATGATGCAAAGCGTAATGAACAAGGAAAAAGGGACAATGGAGACTCAGCAAAGGCTGCTCACTCTGATGAAGGATCTCTATCTTCTATGAACGAGGATGTGAAGCATGAACAGGGTGAAGCCATTAAAGATGACGAGGATGACAACTATAGTGAAAGGTCTGACAAGAATGAAGACTGTAAAAGTGATGTTAACGAGTCAAGTGATGATAGTGACCTCGACAATGGCAAAGCTGGAAGGGACAATCATGTAATACTACACTCTGATGAGGAGAATGATCATGATGCTGCTGGATTGCACATGAAAAACAGTCCAATGCGTGCTTCTGGTCGTCACCTTCAAGAAACCAGAAACCTGGGAGCAAAGAACCGACTGAGGCAAAGACCTACTCGAAACACAGCCATTGATTCTGTTGTCCCTGATTCTGACATTGGAAGCTCGTCTGAGAATCAGAGCTCTAGTGGACCGGGAATGGGAGACCCATCTCTGGTTTCTAATTCCGAGGATGAAATTGGCAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144794.p1 GENE.S_Transcript_144794~~S_Transcript_144794.p1 ORF type:complete len:219 (+),score=58.17 S_Transcript_144794:777-1433(+)
MFLYLICTIIEYSLSFINLFAADFDRTIDEAIKQTRKRKDRKEERYDAKRNEQGKRDNGDSAKAAHSDEGSLSSMNEDVKHEQGEAIKDDEDDNYSERSDKNEDCKSDVNESSDDSDLDNGKAGRDNHVILHSDEENDHDAAGLHMKNSPMRASGRHLQETRNLGAKNRLRQRPTRNTAIDSVVPDSDIGSSSENQSSSGPGMGDPSLVSNSEDEIGS*

Click here to download the sequence:
Link to NCBI Protein BLAST