Transcript Information: S_Transcript_144878.p1


Annotated TAIR IDAT4G35800.1
Annotated Gene NameRNA polymerase II large subunit
Annotated Gene Symbol(s)NRPB1, RPB1, RNA_POL_II_LSRNA_POL_II_LS, RNA_POL_I
Annotation TypeHomolog
Chromosome Positionchr4:16961115-16967892 | Reverse length=1839
E-Value0.0007
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43807409440626
Replicate 20.81714035398203
Replicate 30.53127223286092
Condition 2: 8 Hour
Replicate 11.3163821183415
Replicate 20.18413044147923
Replicate 30.61403676228341
Condition 3: 24 Hour
Replicate 10.98886303866887
Replicate 20.65286700014169
Replicate 30.83035537136185


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144878.p1 GENE.S_Transcript_144878~~S_Transcript_144878.p1 ORF type:5prime_partial len:243 (+),score=28.27 S_Transcript_144878:3-731(+)
CAAATGAACAATGCTATGCAGCCAGCTGTCCAAACTAGCAATGTTGGGCTGCCTGCTATCCGAATGAGCAACGCTGGGGTAACCGTACCTGCTTGCTTCTCCAATGATCCAAAATACGGTATACATCATGACTTGCATGCTTGCTCGCCTAGTGACCCTAGACACGAGGAGCACGAGGACTTGCCTGCTTATTCCTTCAGGAACCTGAGATACGAGAAGGGTAAGGACTTGCCTGGAGGTTATTCCCCCAGTGAACCAAGATACGAGAAGTATAAGGAATTGCATGCTTATTCCCCCAGAGACCCGAGATACGAGAAGCACAAGGACTTACCTGATTATTCCCCCAGTGACCCATACAAGAAGCACAAGGATTCGCGTGTTTCTAGTGCATGTGGGGATTCAGTGAGCCCTGCAAACATCCATAGAATGTCAATGGTTCATGCGCCAGATTGTCCTGAAGCTGCAGTCCCTGATAACTTGAATCATAAGAAGGCTTTCTATTGCAAGAGAGGCTGTAATAACCACCGGGACTTGAATGCACATCGTGATCAAGCCAATAGAAGAAAGTATCAACCAAATTACTGGAAATTTCACCACAATCAAGCCAAATATGATGCGCATAAATACGATCAAAATATCAGAGCACGCGAAAGCAGAAGGTTCCATTCTAGGGAGGATAACGGAGACGACATGGATCGTAGGTGTTCGAACCATACGCAGGATTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144878.p1 GENE.S_Transcript_144878~~S_Transcript_144878.p1 ORF type:5prime_partial len:243 (+),score=28.27 S_Transcript_144878:3-731(+)
QMNNAMQPAVQTSNVGLPAIRMSNAGVTVPACFSNDPKYGIHHDLHACSPSDPRHEEHEDLPAYSFRNLRYEKGKDLPGGYSPSEPRYEKYKELHAYSPRDPRYEKHKDLPDYSPSDPYKKHKDSRVSSACGDSVSPANIHRMSMVHAPDCPEAAVPDNLNHKKAFYCKRGCNNHRDLNAHRDQANRRKYQPNYWKFHHNQAKYDAHKYDQNIRARESRRFHSREDNGDDMDRRCSNHTQDC*

Click here to download the sequence:
Link to NCBI Protein BLAST