Transcript Information: S_Transcript_144900.p1


Annotated TAIR IDAT3G17590.2
Annotated Gene Nametranscription regulatory protein SNF5, putative (BSH)
Annotated Gene Symbol(s)BSH
Annotation TypeOrtholog
Chromosome Positionchr3:6017313-6019591 | Reverse length=242
E-Value5.9E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6539153309999
Replicate 22.2436735143235
Replicate 33.1258874717967
Condition 2: 8 Hour
Replicate 12.7710959169156
Replicate 23.15986562708
Replicate 30.48171407016907
Condition 3: 24 Hour
Replicate 13.0854355212704
Replicate 21.7926178647958
Replicate 32.9924459463697


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144900.p1 GENE.S_Transcript_144900~~S_Transcript_144900.p1 ORF type:complete len:177 (+),score=31.37,SNF5|PF04855.8|7.2e-18,SNF5|PF04855.8|5.7e-12 S_Transcript_144900:170-700(+)
ATGAAGCCCCACCTTTCAGCGGCCTCCAGGACCCCTGTTAAGTTCAGAATGCCAACTGCAGATAACCTTGTGCCCATTCGATTGGACATTGAAATCGATGGTCAGAGATACAAAGATGCATTTACTTGGAACCCTTCAGATCCTGATTCAGAGGTTGCAGTCTTTGCAAAAAGAACTGTGAAGGACTTGAAACTTCCACCAGGATTTGTAACTCAGATTGCACAATCTATTCAATCGCAGTTAACTGAATTCCGATCATATGAAGGTCAAGATATGTTCGTTGGTGAAAAGATTGTTCCTATCAAGTTAGACCTCAGAGTAAATCATACTCTTATCAGGGACCAATTTTTGTGGGATCTCAACAACATGGAAAGTGACCCTGAGGAGTTTGCGAGAACTTTCTGTACCGACATGGATATTGAAGATCCTGAAGTTGCAGTAAGCAAAATTTCACCAAATCATCCTTTTGTGATTTTTATGAATGCTCCTGCTTTGAAACTTGTTTGGATGGTACATTCTGCTCACCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144900.p1 GENE.S_Transcript_144900~~S_Transcript_144900.p1 ORF type:complete len:177 (+),score=31.37,SNF5|PF04855.8|7.2e-18,SNF5|PF04855.8|5.7e-12 S_Transcript_144900:170-700(+)
MKPHLSAASRTPVKFRMPTADNLVPIRLDIEIDGQRYKDAFTWNPSDPDSEVAVFAKRTVKDLKLPPGFVTQIAQSIQSQLTEFRSYEGQDMFVGEKIVPIKLDLRVNHTLIRDQFLWDLNNMESDPEEFARTFCTDMDIEDPEVAVSKISPNHPFVIFMNAPALKLVWMVHSAHL*

Click here to download the sequence:
Link to NCBI Protein BLAST