Transcript Information: S_Transcript_144901.p1


Annotated TAIR IDAT3G17590.2
Annotated Gene Nametranscription regulatory protein SNF5, putative (BSH)
Annotated Gene Symbol(s)BSH
Annotation TypeOrtholog
Chromosome Positionchr3:6017313-6019591 | Reverse length=242
E-Value5.2E-120
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2781557477586
Replicate 21.5452537433279
Replicate 31.0764242850351
Condition 2: 8 Hour
Replicate 10.24893451732062
Replicate 21.2186999258995
Replicate 32.9858774855227
Condition 3: 24 Hour
Replicate 10.93499501321609
Replicate 21.4991626334549
Replicate 31.0795427566392


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144901.p1 GENE.S_Transcript_144901~~S_Transcript_144901.p1 ORF type:complete len:257 (+),score=46.12,SNF5|PF04855.8|1.6e-17,SNF5|PF04855.8|4.3e-11,SNF5|PF04855.8|0.019 S_Transcript_144901:170-940(+)
ATGAAGCCCCACCTTTCAGCGGCCTCCAGGACCCCTGTTAAGTTCAGAATGCCAACTGCAGATAACCTTGTGCCCATTCGATTGGACATTGAAATCGATGGTCAGAGATACAAAGATGCATTTACTTGGAACCCTTCAGATCCTGATTCAGAGGTTGCAGTCTTTGCAAAAAGAACTGTGAAGGACTTGAAACTTCCACCAGGATTTGTAACTCAGATTGCACAATCTATTCAATCGCAGTTAACTGAATTCCGATCATATGAAGGTCAAGATATGTTCGTTGGTGAAAAGATTGTTCCTATCAAGTTAGACCTCAGAGTAAATCATACTCTTATCAGGGACCAATTTTTGTGGGATCTCAACAACATGGAAAGTGACCCTGAGGAGTTTGCGAGAACTTTCTGTACCGACATGGATATTGAAGATCCTGAAGTTGCAACGAGAGGAAAGCGAGCTGGAGTGTGGGGGAGGAATCCAATTATGAAACCTGCAATTGCTTTTGCCATAAGAGAGCAACTTTATGAGATTGCAGTGCAAAATGTTACCTCAGCAAAGGAGATAAAAGTAAATAAGAAGGGTCGCCGGGGGATTGAGTATATCCCAGTCAGTAAAGCCGGTGTAACTGCAGTCGACTTGGTGAAATTGTTTGGTAGTAAATCAAGCGTCATCCGAAAGAGGAAAGACTGGGATGTATTTGAACCAATTGTTGATATTCTATCAAATGAAGAGGTAGAAGTACTTGAAGCAAGAGAAGATCGGATTGCTCGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144901.p1 GENE.S_Transcript_144901~~S_Transcript_144901.p1 ORF type:complete len:257 (+),score=46.12,SNF5|PF04855.8|1.6e-17,SNF5|PF04855.8|4.3e-11,SNF5|PF04855.8|0.019 S_Transcript_144901:170-940(+)
MKPHLSAASRTPVKFRMPTADNLVPIRLDIEIDGQRYKDAFTWNPSDPDSEVAVFAKRTVKDLKLPPGFVTQIAQSIQSQLTEFRSYEGQDMFVGEKIVPIKLDLRVNHTLIRDQFLWDLNNMESDPEEFARTFCTDMDIEDPEVATRGKRAGVWGRNPIMKPAIAFAIREQLYEIAVQNVTSAKEIKVNKKGRRGIEYIPVSKAGVTAVDLVKLFGSKSSVIRKRKDWDVFEPIVDILSNEEVEVLEAREDRIAR*

Click here to download the sequence:
Link to NCBI Protein BLAST