Transcript Information: S_Transcript_144929.p1


Annotated TAIR IDAT5G54130.2
Annotated Gene NameCalcium-binding endonuclease/exonuclease/phosphatase family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21962900-21965279 | Forward length=436
E-Value5E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8502666909434
Replicate 211.174659646014
Replicate 39.4010050815756
Condition 2: 8 Hour
Replicate 12.1463866877634
Replicate 22.1790761662071
Replicate 31.5917678406317
Condition 3: 24 Hour
Replicate 117.731236599508
Replicate 215.379014998236
Replicate 318.834643549275


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_144929.p1 GENE.S_Transcript_144929~~S_Transcript_144929.p1 ORF type:5prime_partial len:308 (-),score=47.51,Exo_endo_phos|PF03372.19|8.7e-07 S_Transcript_144929:450-1373(-)
CTTTTGACTGCATACATGGGTGAATCAGTGAAAGCGTTGGATCAAGAGCTTTGTGATCAAGATCGGCATGAATCCCAGTATTTGAATTCCTCGGATACAATTTCTTGCACAACTTTCAATATTCTTGCTCCTATTTACAAACGTTTGGGTGGAGGGGTACGTGAGAGTGAGTTCAGGGAGTCTTGGCACAGTCGGAACAAAAGCATATTGGATAGGTTGCTTCAATTGAAATCCTCAATCATATGCTTGCAGGAATTTTGGGTGGGTAATGAAGAGCTTGTAGCGATGTATGAAAAGAGGCTTCATGATGCTGGTTACTTAACTTACAAGCTTGCACGAACAAACAACCGTGGTGATGGTCTGTTAACAGCAGTACATCAAAGCCAGTTCCGTGTGTTAAATTATAGGGAGCTTCTATTCAATGACATTGCTGATCGAGTTGCACAGATTCTGCATGTTGAGATAAGTTGTACCATTTCCCAGAGCACTTCCACCCGTGTACTGAAGGAAGCCTTAATAGTCAATACTCATTTGATATTTCCACATGATTCCAGATACTGTTTCCTCCGACTACAGCAGGTCTACAAGATTTTGCAATATCTCAGATCATACTTGAACAAATATGCTCGCTTCCTGTCATCATCTGTGGGGATTGGAATGGAAGCAAGAAGGGAACATGTCTATAAGTTTTTATGTTCACAAGGCTTTCTTTCGTCCTATGACATTGCTCACCATACTGAAGATGAAACTGAAAACACACAGAAGTGGATTAGTCACCGCAACCACAGGGGAAATATCTGTGGAGTGGATTTCATATGGCTTCAAAATCCTCAGAAATTCAAGACCCTTAAAAGAGAGCTTCGTGGAAGCGATTTTGGGGAACATAAAGAACCTGCTTCACAAGGTAATCACAAAAGATGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_144929.p1 GENE.S_Transcript_144929~~S_Transcript_144929.p1 ORF type:5prime_partial len:308 (-),score=47.51,Exo_endo_phos|PF03372.19|8.7e-07 S_Transcript_144929:450-1373(-)
LLTAYMGESVKALDQELCDQDRHESQYLNSSDTISCTTFNILAPIYKRLGGGVRESEFRESWHSRNKSILDRLLQLKSSIICLQEFWVGNEELVAMYEKRLHDAGYLTYKLARTNNRGDGLLTAVHQSQFRVLNYRELLFNDIADRVAQILHVEISCTISQSTSTRVLKEALIVNTHLIFPHDSRYCFLRLQQVYKILQYLRSYLNKYARFLSSSVGIGMEARREHVYKFLCSQGFLSSYDIAHHTEDETENTQKWISHRNHRGNICGVDFIWLQNPQKFKTLKRELRGSDFGEHKEPASQGNHKRW*

Click here to download the sequence:
Link to NCBI Protein BLAST